RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ECH1Q13011 328 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 MAB21L1Q13394 359 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 IRF4Q15306 451 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 SF3A2Q15428 464 aaKnown RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 PPP1R7Q15435 360 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 LY6EQ16553 131 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 RABL6Q3YEC7 729 aaPredicted RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 ARL9Q6T311 187 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 IGFL1Q6UW32 110 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 FBXW12Q6X9E4 464 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 NCCRP1Q6ZVX7 275 aaPredicted RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 NANOGNBQ7Z5D8 188 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 TTC5Q8N0Z6 440 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ZNF615Q8N8J6 731 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 OR7G2Q8NG99 324 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 OR2A1Q8NGT9 310 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 RAB3IL1Q8TBN0 382 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 C15orf40Q8WUR7 153 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 MRGPRFQ96AM1 343 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ATP5SQ99766 215 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 LZTS2Q9BRK4 669 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 C12orf10Q9HB07 376 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 SIRT7Q9NRC8 400 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 UVRAGQ9P2Y5 699 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ST3GAL6Q9Y274 331 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 TMED5Q9Y3A6 229 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 GOLT1BQ9Y3E0 138 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 PLA2R1Q13018 1463 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 CAMTA1Q9Y6Y1 1673 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 TSPOAP1O95153 1857 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 SHANK1Q9Y566 2161 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 GPATCH8Q9UKJ3 1502 aaKnown RBP1.27□□□□□ -2.21
PCM1-217ENST00000522998 USP47Q96K76 1375 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 COLCA2A8K830 154 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 SERPINE3A8MV23 424 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 RAB29O14966 203 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 PPP1R2P9O14990 202 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 RBFOX2O43251 390 aaKnown RBP eCLIP1.27□□□□□ -2.21
PCM1-217ENST00000522998 CHST1O43916 411 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 GCM2O75603 506 aaPredicted RBP1.27□□□□□ -2.21
PCM1-217ENST00000522998 CLIC3O95833 236 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 IGHDP01880 384 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 LINC00869P0C866 280 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ZNF286BP0CG31 522 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 TNNI1P19237 187 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 F2RP25116 425 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 CHMLP26374 656 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 CEACAM6P40199 344 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 TMED10P49755 219 aaKnown RBP1.27□□□□□ -2.21
PCM1-217ENST00000522998 TWF1Q12792 350 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 OR7A5Q15622 319 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ZNF726P1Q15940 193 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ZSCAN26Q16670 478 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 KRTAP13-2Q52LG2 175 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 XKR7Q5GH72 579 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 CCNJQ5T5M9 372 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 FBXW9Q5XUX1 488 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 TAS2R42Q7RTR8 314 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 SLC22A9Q8IVM8 553 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ZNF547Q8IVP9 402 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 RIMKLAQ8IXN7 391 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 IQCKQ8N0W5 287 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ZNF709Q8N972 641 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 OR56B2PQ8NGI1 322 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 AKR7LQ8NHP1 331 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 RGP1Q92546 391 aaPredicted RBP1.27□□□□□ -2.21
PCM1-217ENST00000522998 ELMO1Q92556 727 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 ESR2Q92731 530 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 TM4SF18Q96CE8 201 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 RASD2Q96D21 266 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 CCDC126Q96EE4 140 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 NARS2Q96I59 477 aaKnown RBP1.27□□□□□ -2.21
PCM1-217ENST00000522998 OR51M1Q9H341 326 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 GGA2Q9UJY4 613 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 HPCAL4Q9UM19 191 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 WIF1Q9Y5W5 379 aa1.27□□□□□ -2.21
PCM1-217ENST00000522998 IGLV1-36A0A0B4J1U3 117 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 TRBV11-1A0A0K0K1C0 115 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 HEATR9A2RTY3 570 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 LRRIQ3A6PVS8 624 aaPredicted RBP1.26□□□□□ -2.21
PCM1-217ENST00000522998 BPY2O14599 106 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 RAD51BO15315 384 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 SOCS1O15524 211 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 KLHL41O60662 606 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 AQP8O94778 261 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 YIF1AO95070 293 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 VAMP5O95183 116 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 OR5H8P0DN80 308 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 TROVE2P10155 538 aaKnown RBP eCLIP1.26□□□□□ -2.21
PCM1-217ENST00000522998 ZNF250P15622 560 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 DCKP27707 260 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 OTX1P32242 354 aaPredicted RBP1.26□□□□□ -2.21
PCM1-217ENST00000522998 CDH6P55285 790 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 PRMT2P55345 433 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 PRR3P79522 188 aaKnown RBP1.26□□□□□ -2.21
PCM1-217ENST00000522998 IDI1Q13907 227 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 QPRTQ15274 297 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 PGGHGQ32M88 737 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 COX19Q49B96 90 aa1.26□□□□□ -2.21
PCM1-217ENST00000522998 ZNF684Q5T5D7 378 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms