RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 A0A087WUJ7 227 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 A0A096LPI6 279 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 RAD51CO43502 376 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 AKAP8O43823 692 aaKnown RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 IL7RP16871 459 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 STOMP27105 288 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 CSNK1A1P48729 337 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ERFP50548 548 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 DLX1P56177 255 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 PPP1CBP62140 327 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ARF6P62330 175 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 HOXC5Q00444 222 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 HABP2Q14520 560 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 PABPC1L2AQ5JQF8 200 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 FAM69AQ5T7M9 428 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMEM53Q6P2H8 277 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ADAMTSL5Q6ZMM2 481 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF836Q6ZNA1 936 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 SERPINA11Q86U17 422 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 SCCPDHQ8NBX0 429 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 RBM15BQ8NDT2 890 aaKnown RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ADPRHL1Q8NDY3 354 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 C19orf18Q8NEA5 215 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 TRNT1Q96Q11 434 aaKnown RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 PAFAH2Q99487 392 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 ASCL2Q99929 193 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 MTHFD2LQ9H903 347 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 RNF121Q9H920 327 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 SMURF1Q9HCE7 757 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 GLTPQ9NZD2 209 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 NINJ2Q9NZG7 142 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 KLHL14Q9P2G3 628 aa7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 CGGBP1Q9UFW8 167 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 LSM4Q9Y4Z0 139 aaKnown RBP7.23□□□□□ -1.25
TRAPPC9-212ENST00000521944 IGHV3-64DA0A0J9YX35 117 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 C5orf49A4QMS7 147 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF726A6NNF4 738 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMEM233B4DJY2 109 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 LRRN3E7EW58 273 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 CRCPO75575 148 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 AGR2O95994 175 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 PTHP01270 115 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 LIPFP07098 398 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 GSTA1P08263 222 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 LYL1P12980 280 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 UQCRBP14927 111 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 TCP1P17987 556 aaKnown RBP7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 NCF2P19878 526 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 AHCYP23526 432 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR4F3Q6IEY1 312 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 LRRC74BQ6ZQY2 392 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC16A14Q7RTX9 510 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 SNX32Q86XE0 403 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF440Q8IYI8 595 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 NATD1Q8N6N6 113 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 TEX37Q96LM6 180 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 MOGAT1Q96PD6 335 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF607Q96SK3 696 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 C1orf50Q9BV19 199 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC19A3Q9BZV2 496 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 LRMDAQ9H2I8 198 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 CENPHQ9H3R5 247 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 INPP5EQ9NRR6 644 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ATAD3AQ9NVI7 634 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 ERVK13-1Q9NX77 482 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 PRDM4Q9UKN5 801 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 FAM96BQ9Y3D0 163 aa7.22□□□□□ -1.25
TRAPPC9-212ENST00000521944 E9PQ18 207 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 PLPP3O14495 311 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 AZIN1O14977 448 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 ANGPTL7O43827 346 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 CHST1O43916 411 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 TIMM8AO60220 97 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 LYPLA1O75608 230 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 ZFPL1O95159 310 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 BGLAPP02818 100 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 DBIP07108 87 aaKnown RBP7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 FBP1P09467 338 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 NEFHP12036 1026 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 GCAP28676 217 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 GTF2E2P29084 291 aaKnown RBP7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 APLNRP35414 380 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 RPL3P39023 403 aaKnown RBP7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 SERPINB9P50453 376 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 BIDP55957 195 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 COPZ1P61923 177 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 SLC36A2Q495M3 483 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 ZMAT1Q5H9K5 638 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 METTL11BQ5VVY1 283 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 IL23RQ5VWK5 629 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 KANK2Q63ZY3 851 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 ZFAND6Q6FIF0 208 aa7.21□□□□□ -1.26
TRAPPC9-212ENST00000521944 TIFABQ6ZNK6 161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms