RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 STOMP27105 288 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 APLNRP35414 380 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 THBS4P35443 961 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 EFNA4P52798 201 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 MYBPC1Q00872 1141 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 RAB39AQ14964 217 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 PABPC1L2AQ5JQF8 200 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 TMEM179BQ7Z7N9 219 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 ZNF416Q9BWM5 594 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 NUAK2Q9H093 628 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 HDHD2Q9H0R4 259 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SYT4Q9H2B2 425 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SEC61A2Q9H9S3 476 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 TBC1D23Q9NUY8 699 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.16□□□□□ -1.1
CLK4-209ENST00000521621 A0A1B0GWJ7 208 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SYNGR3O43761 229 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SLC16A7O60669 478 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 LIPAP38571 399 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SNRPD2P62316 118 aaKnown RBP8.16□□□□□ -1.1
CLK4-209ENST00000521621 TUBA1BP68363 451 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 TUBA4AP68366 448 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 GALK2Q01415 458 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 SLC35D3Q5M8T2 416 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 TUBA1AQ71U36 451 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 MEX3DQ86XN8 651 aaKnown RBP8.16□□□□□ -1.1
CLK4-209ENST00000521621 OR6V1Q8N148 313 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 CPEB3Q8NE35 698 aaKnown RBP8.16□□□□□ -1.1
CLK4-209ENST00000521621 GJC3Q8NFK1 279 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 OR10H5Q8NGA6 315 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 NIPSNAP1Q9BPW8 284 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 PLA2G12AQ9BZM1 189 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 EGLN3Q9H6Z9 239 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 RNF121Q9H920 327 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 ELOVL3Q9HB03 270 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 PDP1Q9P0J1 537 aaPredicted RBP8.16□□□□□ -1.1
CLK4-209ENST00000521621 CYB5R1Q9UHQ9 305 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 GPR160Q9UJ42 338 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 POU2F3Q9UKI9 436 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
CLK4-209ENST00000521621 OR6C68A6NDL8 312 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 GNGT2O14610 69 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 IGHV3-13P01766 116 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 SCG5P05408 212 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 OR4A8P0C604 315 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 CAPZA2P47755 286 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 UCP2P55851 309 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 EFNB1P98172 346 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 C1orf146Q5VVC0 180 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 KDM4DQ6B0I6 523 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 SLC27A4Q6P1M0 643 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 LEG1Q6P5S2 330 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 COLCA1Q6ZS62 124 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
CLK4-209ENST00000521621 SLC37A3Q8NCC5 494 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 OR4Q3Q8NH05 313 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 TEX47Q8TBZ9 253 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 CENPNQ96H22 339 aaPredicted RBP8.15□□□□□ -1.1
CLK4-209ENST00000521621 RAB3IPQ96QF0 476 aaPredicted RBP8.15□□□□□ -1.1
CLK4-209ENST00000521621 TSSK6Q9BXA6 273 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 CDH20Q9HBT6 801 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 CYSLTR2Q9NS75 346 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
CLK4-209ENST00000521621 SLCO1C1Q9NYB5 712 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 COA3Q9Y2R0 106 aaPredicted RBP8.15□□□□□ -1.1
CLK4-209ENST00000521621 AKAP9Q99996 3911 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 ADGRG4Q8IZF6 3080 aa8.15□□□□□ -1.1
CLK4-209ENST00000521621 PRRC2AP48634 2157 aaKnown RBP8.15□□□□□ -1.11
CLK4-209ENST00000521621 SOCS2O14508 198 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 PRODHO43272 600 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 SEC14L2O76054 403 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 GIFP27352 417 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 GGT2P36268 569 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 SGCAQ16586 387 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 CCDC92Q53HC0 331 aaPredicted RBP8.15□□□□□ -1.11
CLK4-209ENST00000521621 Q5PR19 223 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 LURAP1LQ8IV03 231 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 C11orf40Q8WZ69 217 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 NSMAFQ92636 917 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 DIRC2Q96SL1 478 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 NMNAT3Q96T66 252 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 C1QTNF6Q9BXI9 259 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 TEX12Q9BXU0 123 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 USE1Q9NZ43 259 aa8.15□□□□□ -1.11
CLK4-209ENST00000521621 EIF3KQ9UBQ5 218 aaKnown RBP8.15□□□□□ -1.11
CLK4-209ENST00000521621 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.11
CLK4-209ENST00000521621 CENPEQ02224 2701 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 ABCA12Q86UK0 2595 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 A0A1W2PPL8 197 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 VWC2LB2RUY7 222 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 SLC25A16P16260 332 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 ZNF3P17036 446 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 OTX1P32242 354 aaPredicted RBP8.14□□□□□ -1.11
CLK4-209ENST00000521621 CDAP32320 146 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 GDI2P50395 445 aaKnown RBP8.14□□□□□ -1.11
CLK4-209ENST00000521621 TEKQ02763 1124 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 SNTB2Q13425 540 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms