RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ADIPOR1Q96A54 375 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 KIAA1143Q96AT1 154 aaPredicted RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 OMA1Q96E52 524 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 IMMP1LQ96LU5 166 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 PIP5K1AQ99755 562 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 SLC29A1Q99808 456 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 ARHGDIGQ99819 225 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 CIB1Q99828 191 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 WFDC6Q9BQY6 131 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 C9orf16Q9BUW7 83 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 FNDC11Q9BVV2 318 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 HOXD1Q9GZZ0 328 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 VCXQ9H320 206 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 ARMC7Q9H6L4 198 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 REEP1Q9H902 201 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 GPN2Q9H9Y4 310 aaPredicted RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 NTN4Q9HB63 628 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 ASCL3Q9NQ33 180 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 UBQLN4Q9NRR5 601 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 P4HTMQ9NXG6 502 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 VNN3Q9NY84 501 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 FLRT3Q9NZU0 649 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 RHCGQ9UBD6 479 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 IL17BQ9UHF5 180 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 ZNF223Q9UK11 482 aaPredicted RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 FBXL4Q9UKA2 621 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 GTF2A1LQ9UNN4 478 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 PPIEQ9UNP9 301 aaKnown RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 NTNG1Q9Y2I2 539 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 SAMHD1Q9Y3Z3 626 aaKnown RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 MRPS18BQ9Y676 258 aaKnown RBP3.4□□□□□ -1.87
CLK4-207ENST00000520909 U3KQV3 271 aa3.4□□□□□ -1.87
CLK4-207ENST00000520909 CNTRLQ7Z7A1 2325 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 CACNA1AO00555 2505 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 NINQ8N4C6 2090 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 TRBV4-1A0A0J9YWV2 114 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 TRABD2BA6NFA1 517 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 CPSF4LA6NMK7 179 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 CDRT15L2A8MXV6 281 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 NPIPB9F8W1W9 429 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 G3V2T6 193 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 H3BNH8 94 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 AP3D1O14617 1153 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 EI24O14681 340 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 FFAR1O14842 300 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ADAMDEC1O15204 470 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 TSPAN2O60636 221 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 TPST2O60704 377 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ZNF354AO60765 605 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 ICOSLGO75144 302 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 UGT2B11O75310 529 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 BCAS1O75363 584 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 OR2J2O76002 312 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 GADD45GO95257 159 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 OXSR1O95747 527 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 EPPINO95925 133 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 HPP00738 406 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 CSTAP01040 98 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 SERPINA7P05543 415 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 H1F0P07305 194 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 GUSBP08236 651 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 UBTFL6P0CB48 400 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 GKN3PP0CG01 181 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 UBL4AP11441 157 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ICAM2P13598 275 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ZNF182P17025 639 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 TBXA2RP21731 343 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 RPS4Y1P22090 263 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 ABCD3P28288 659 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 LCN1P31025 176 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 RRM2P31350 389 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 IFNA8P32881 189 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ARHGDIAP52565 204 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 PNLIPRP2P54317 469 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 AQP4P55087 323 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 FBXW4P57775 412 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 TAS2R41P59536 307 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 PSPHP78330 225 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 DCTN2Q13561 401 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 GANABQ14697 944 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 NPTX1Q15818 432 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 ZSWIM7Q19AV6 140 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 EXOC3L2Q2M3D2 409 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 NDUFAF6Q330K2 333 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 IQCCQ4KMZ1 466 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 KLHL26Q53HC5 615 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 FGD3Q5JSP0 725 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 SLC25A30Q5SVS4 291 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 MRPL2Q5T653 305 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 AP1ARQ63HQ0 302 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 SHQ1Q6PI26 577 aaKnown RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 IZUMO2Q6UXV1 221 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 MARCH3Q86UD3 253 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 VASH2Q86V25 355 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 RANBP3LQ86VV4 465 aaPredicted RBP3.39□□□□□ -1.87
CLK4-207ENST00000520909 HIPK1Q86Z02 1210 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 HS3ST5Q8IZT8 346 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 SVOPLQ8N434 492 aa3.39□□□□□ -1.87
CLK4-207ENST00000520909 SLC5A8Q8N695 610 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms