RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ACTC1P68032 377 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ACTA1P68133 377 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ADAM8P78325 824 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 PLP2Q04941 152 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ECH1Q13011 328 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 GSG1Q2KHT4 349 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 C9orf135Q5VTT2 229 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 SKA3Q8IX90 412 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 TIGD4Q8IY51 512 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 BBS1Q8NFJ9 593 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 OR2T27Q8NH04 317 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 APH1BQ8WW43 257 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 S100PBPQ96BU1 408 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ZNF416Q9BWM5 594 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 WDR76Q9H967 626 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 CCNB1IP1Q9NPC3 277 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 INPP5EQ9NRR6 644 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 MRPL22Q9NWU5 206 aaKnown RBP8.29□□□□□ -1.08
CLN8-203ENST00000518780 SCN3BQ9NY72 215 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 B3GNT2Q9NY97 397 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 CNOT2Q9NZN8 540 aaKnown RBP8.29□□□□□ -1.08
CLN8-203ENST00000518780 DNAJC27Q9NZQ0 273 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 BLOC1S6Q9UL45 172 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 POLR1DQ9Y2S0 133 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 SLC25A15Q9Y619 301 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 COMMD3-BMI1R4GMX3 469 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ALPK2Q86TB3 2170 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 FLNCQ14315 2725 aa8.29□□□□□ -1.08
CLN8-203ENST00000518780 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 A0A096LPE4 126 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 IQCMA0A1B0GVH7 501 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 A0A1W2PPZ6 126 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 TUBAL3A6NHL2 446 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 FAM171A2A8MVW0 826 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 M0R129 80 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 ZNF593O00488 134 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 CASKO14936 926 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 RAB36O95755 333 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 MMP7P09237 267 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 SBK2P0C263 348 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 DBTP11182 482 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 PIPP12273 146 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 IGFBP2P18065 325 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 DCKP27707 260 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 SLC15A1P46059 708 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 RAB1AP62820 205 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 HIST1H3AP68431 136 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLN8-203ENST00000518780 ENDOGQ14249 297 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 PPA1Q15181 289 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 CDSNQ15517 529 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 HIKESHIQ53FT3 197 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 RBM48Q5RL73 367 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 HIST2H3PS2Q5TEC6 136 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 SLC18B1Q6NT16 456 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 KCTD18Q6PI47 426 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 DEGS2Q6QHC5 323 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 HIST2H3AQ71DI3 136 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 ERI1Q8IV48 349 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 WDR31Q8NA23 367 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 ACBD4Q8NC06 268 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 OR51L1Q8NGJ5 315 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 OTOSQ8NHW6 89 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 FAM222BQ8WU58 562 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 ZNRF4Q8WWF5 429 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 ZMYND19Q96E35 227 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 MRPL48Q96GC5 212 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 SH3GL3Q99963 347 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 HDHD2Q9H0R4 259 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 RNF121Q9H920 327 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 CRNNQ9UBG3 495 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 EXOGQ9Y2C4 368 aaKnown RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 TPRKBQ9Y3C4 175 aa8.28□□□□□ -1.08
CLN8-203ENST00000518780 NCOA6Q14686 2063 aaPredicted RBP8.28□□□□□ -1.08
CLN8-203ENST00000518780 INTS1Q8N201 2190 aaKnown RBP8.27□□□□□ -1.09
CLN8-203ENST00000518780 LRRK2Q5S007 2527 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 TVP23AA6NH52 213 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 MRPS14O60783 128 aaKnown RBP8.27□□□□□ -1.09
CLN8-203ENST00000518780 ZNF254O75437 659 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 MPZL1O95297 269 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 IGKV3-15P01624 115 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 HLA-HP01893 362 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 APOC1P02654 83 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 SERPINA5P05154 406 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 SCG5P05408 212 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 CD79AP11912 226 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 ZNF32P17041 273 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 ALOX5APP20292 161 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 PTAFRP25105 342 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 CCKARP32238 428 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 KIR2DL3P43628 341 aa8.27□□□□□ -1.09
CLN8-203ENST00000518780 CAPZA2P47755 286 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms