RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	LOC390937	A0A1W2PQ73	354 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	C12orf71	A8MTZ7	269 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326		M0R233	179 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	TNFRSF11B	O00300	401 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	GPANK1	O95872	356 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	TP53	P04637	393 aa	Predicted RBP	13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	IFNGR2	P38484	337 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	RAD52	P43351	418 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	NR4A2	P43354	598 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	MAGEA2	P43356	314 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	GDI2	P50395	445 aa	Known RBP	13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	RPS6KA3	P51812	740 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	HMGA2	P52926	109 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	PCBD1	P61457	104 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	GGTLC2	Q14390	218 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	TMEM249	Q2WGJ8	235 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	MTX3	Q5HYI7	312 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	C1orf94	Q6P1W5	598 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	TRPM8	Q7Z2W7	1104 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	ADCK1	Q86TW2	530 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	ZNF101	Q8IZC7	436 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	OR9Q2	Q8NGE9	314 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	OR4C15	Q8NGM1	316 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	SYNPR	Q8TBG9	265 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	GNPDA2	Q8TDQ7	276 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	PIMREG	Q9BSJ6	248 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	THTPA	Q9BU02	230 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	NUAK2	Q9H093	628 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	MUC13	Q9H3R2	512 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	VNN3	Q9NY84	501 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	TAAR3P	Q9P1P4	343 aa		13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	PRPF19	Q9UMS4	504 aa	Known RBP	13.49	□□□□□ -0.25
SEC31A-238	ENST00000514326	RTTN	Q86VV8	2226 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	NAV3	Q8IVL0	2385 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	DCTN6	O00399	190 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	CD5L	O43866	347 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	KHDRBS3	O75525	346 aa	Known RBP	13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	KRT36	O76013	467 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	UBOX5	O94941	541 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	STAMBP	O95630	424 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	ERCC1	P07992	297 aa	Predicted RBP	13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	NAT2	P11245	290 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	ZNF250	P15622	560 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	USF1	P22415	310 aa	Predicted RBP	13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	SLC6A6	P31641	620 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	PPP2R2B	Q00005	443 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	TSPAN31	Q12999	210 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	SPATA46	Q5T0L3	261 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	ALDH16A1	Q8IZ83	802 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	OR1J1	Q8NGS3	322 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	UBASH3B	Q8TF42	649 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	C11orf40	Q8WZ69	217 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	BTBD10	Q9BSF8	475 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	IFT27	Q9BW83	186 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	BCL2L14	Q9BZR8	327 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	C1orf21	Q9H246	121 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	MAGIX	Q9H6Y5	334 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	YAE1D1	Q9NRH1	226 aa		13.48	□□□□□ -0.25
SEC31A-238	ENST00000514326	IGHV4-61	A0A0C4DH41	118 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	NDUFS8	O00217	210 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ACOT8	O14734	319 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	GAST	P01350	101 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	HPX	P02790	462 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	APEH	P13798	732 aa	Known RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	HIST1H1C	P16403	213 aa	Known RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	CENPA	P49450	140 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	KLF3	P57682	345 aa	Predicted RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	GLO1	Q04760	184 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	NKPD1	Q17RQ9	610 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	LEG1	Q6P5S2	330 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ZNF620	Q6ZNG0	422 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	RFPL4B	Q6ZWI9	263 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	SYT9	Q86SS6	491 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	GLB1L2	Q8IW92	636 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	OR4K13	Q8NH42	304 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	GTF3A	Q92664	365 aa	Known RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ASB9	Q96DX5	294 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	NMNAT3	Q96T66	252 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	BPESC1	Q9GZL8	116 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	MS4A5	Q9H3V2	200 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	EGLN3	Q9H6Z9	239 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	SRA1	Q9HD15	236 aa	Known RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	EIF3K	Q9UBQ5	218 aa	Known RBP	13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	ABCA1	O95477	2261 aa		13.47	□□□□□ -0.25
SEC31A-238	ENST00000514326	IGLV3-9	A0A075B6K5	115 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	ARPC3	O15145	178 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	CCNB2	O95067	398 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	NGF	P01138	241 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	IGHV4-31	P0DP07	118 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	MPV17	P39210	176 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	SELENOV	P59797	346 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	MEP1B	Q16820	701 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	FAM98B	Q52LJ0	330 aa	Known RBP	13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	TMEM255A	Q5JRV8	349 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	CLEC12A	Q5QGZ9	265 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	ELFN2	Q5R3F8	820 aa		13.46	□□□□□ -0.25
SEC31A-238	ENST00000514326	SLC35F1	Q5T1Q4	408 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms