RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 PINLYPA6NC86 204 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 ZNF726A6NNF4 738 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 CDRT15L2A8MXV6 281 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 TNFSF11O14788 317 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 TLX3O43711 291 aaPredicted RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 APOA1P02647 267 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 NR2C1P13056 603 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 SPNP16150 400 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 ITGA3P26006 1051 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 CLDN17P56750 224 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 ASAH1Q13510 395 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 STAC2Q6ZMT1 411 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 CREB3L2Q70SY1 520 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 PRSS33Q8NF86 280 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 MCHR2Q969V1 340 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 FER1L6-AS2Q96M78 137 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 UCN2Q96RP3 112 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 SLITRK2Q9H156 845 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 MALT1Q9UDY8 824 aa13.29□□□□□ -0.28
VCAN-211ENST00000513984 BOKQ9UMX3 212 aaPredicted RBP13.29□□□□□ -0.28
VCAN-211ENST00000513984 SPAARA0A1B0GVQ0 90 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 A0A1W2PPL8 197 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 AIPO00170 330 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 TALDO1P37837 337 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 SOX2P48431 317 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 ZNF133P52736 654 aaPredicted RBP13.28□□□□□ -0.28
VCAN-211ENST00000513984 RAC3P60763 192 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 KCNMB1Q16558 191 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 GGNQ86UU5 652 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 TMPRSS12Q86WS5 348 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 RDH10Q8IZV5 341 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 Q8N402 240 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 OR51A4Q8NGJ6 313 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 ADAMTS14Q8WXS8 1223 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 CMTM3Q96MX0 182 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 SIGLEC12Q96PQ1 595 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 FAM173AQ9BQD7 235 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 UTP23Q9BRU9 249 aaKnown RBP13.28□□□□□ -0.28
VCAN-211ENST00000513984 SRXN1Q9BYN0 137 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 TCF7L1Q9HCS4 588 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 RHBDL2Q9NX52 303 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 SLC22A13Q9Y226 551 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 V9GY05 133 aa13.28□□□□□ -0.28
VCAN-211ENST00000513984 IGHV3-15A0A0B4J1V0 119 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 IFITM5A6NNB3 132 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 F10P00742 488 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 QDPRP09417 244 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.28
VCAN-211ENST00000513984 GDF1P27539 372 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 CLDN20P56880 219 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 MFAP5Q13361 173 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 MADCAM1Q13477 382 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 LRFN4Q6PJG9 635 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 CORO6Q6QEF8 472 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.28
VCAN-211ENST00000513984 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 LRRTM1Q86UE6 522 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 OR2M7Q8NG81 312 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 OR4M1Q8NGD0 313 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 TMEM106AQ96A25 262 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 SFXN2Q96NB2 322 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 OR2M2Q96R28 347 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 SF3B5Q9BWJ5 86 aaKnown RBP13.27□□□□□ -0.28
VCAN-211ENST00000513984 BRD7Q9NPI1 651 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 LHFPL6Q9Y693 200 aa13.27□□□□□ -0.28
VCAN-211ENST00000513984 SMAD9O15198 467 aaKnown RBP13.27□□□□□ -0.29
VCAN-211ENST00000513984 ADRA2CP18825 462 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 DCTDP32321 178 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 ODF4Q2M2E3 257 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 WIPI1Q5MNZ9 446 aaPredicted RBP13.27□□□□□ -0.29
VCAN-211ENST00000513984 CLEC1AQ8NC01 280 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 SNRNP27Q8WVK2 155 aaKnown RBP13.27□□□□□ -0.29
VCAN-211ENST00000513984 TMEM54Q969K7 222 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 SLAMF6Q96DU3 332 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 ADGRG7Q96K78 797 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 MRI1Q9BV20 369 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 C1orf198Q9H425 327 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 G6PC2Q9NQR9 355 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 ETAA1Q9NY74 926 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 GLTPQ9NZD2 209 aa13.27□□□□□ -0.29
VCAN-211ENST00000513984 TRAV8-7A0A075B6U6 113 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 A0A0B4J203 849 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 A0A0G2JMP0 313 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 A0A0X1KG70 313 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 H0YC42 278 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 CDK2AP1O14519 115 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 SSX4O60224 188 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 SLC43A1O75387 559 aa13.26□□□□□ -0.29
VCAN-211ENST00000513984 WDPCPO95876 746 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms