RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 MAP6Q96JE9 813 aa11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 SDHCQ99643 169 aaPredicted RBP11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 MRI1Q9BV20 369 aa11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 RABL2BQ9UNT1 228 aa11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 OTOGQ6ZRI0 2925 aa11.7□□□□□ -0.54
DEPDC1B-206ENST00000512452 CENPEQ02224 2701 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 A0A0G2JK05 382 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR2M5A3KFT3 312 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR4C45A6NMZ5 311 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 MAGEB4O15481 346 aaPredicted RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 EFSO43281 561 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 PFDN1O60925 122 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 TNFSF15O95150 251 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZFPL1O95159 310 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 APOA1P02647 267 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 CNR1P21554 472 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 BIDP55957 195 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 NANOS3P60323 173 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 ADAM8P78325 824 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 AIMP2Q13155 320 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF79Q15937 498 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 Q499Y3 187 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 RAET1LQ5VY80 246 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 FAM131AQ6UXB0 335 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 LRRC28Q86X40 367 aaPredicted RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR52N5Q8NH56 324 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 PSMF1Q92530 271 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 DNAJA3Q96EY1 480 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 C4orf45Q96LM5 186 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 FER1L6-AS2Q96M78 137 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 DERL3Q96Q80 235 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 SLITRK2Q9H156 845 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 PPIL3Q9H2H8 161 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 SLCO1C1Q9NYB5 712 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 COMMD3Q9UBI1 195 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 COA3Q9Y2R0 106 aaPredicted RBP11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 CSMD1Q96PZ7 3565 aa11.69□□□□□ -0.54
DEPDC1B-206ENST00000512452 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 NCR1O76036 304 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 SPARCP09486 303 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF43P17038 809 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 DCTDP32321 178 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 THBS2P35442 1172 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 PSMD7P51665 324 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 AGFG1P52594 562 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 RIDAP52758 137 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 CAV3P56539 151 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 KCNMB1Q16558 191 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 MEP1BQ16820 701 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF468Q5VIY5 522 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 TMEM225Q6GV28 225 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 RHOUQ7L0Q8 258 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 SLC22A16Q86VW1 577 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 NR2C2APQ86WQ0 139 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 KDM8Q8N371 416 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 POC5Q8NA72 575 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 GPR148Q8TDV2 347 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 THOC3Q96J01 351 aaKnown RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 TXNDC15Q96J42 360 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 GNRHR2Q96P88 292 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 PDCD1LG2Q9BQ51 273 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR2B2Q9GZK3 357 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 CYSLTR2Q9NS75 346 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 DNHD1Q96M86 4753 aa11.68□□□□□ -0.54
DEPDC1B-206ENST00000512452 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SDK2Q58EX2 2172 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 LOC101059948A0A1B0GTJ6 334 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 A0A1W2PNR3 127 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 TTLL8A6PVC2 850 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 GPR171O14626 319 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 DVL2O14641 736 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 EPXP11678 715 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SRMP19623 302 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 NPR2P20594 1047 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 LAP3P28838 519 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SFTPDP35247 375 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 TALDO1P37837 337 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF133P52736 654 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SCAND1P57086 179 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 CLRN1P58418 232 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SCN1BQ07699 218 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 EIF2B1Q14232 305 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 DCAF10Q5QP82 559 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms