RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CDH10Q9Y6N8 788 aa11.67□□□□□ -0.54
SNF8-206ENST00000509989 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
SNF8-206ENST00000509989 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 H7C417 338 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 ARPC3O15145 178 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 KHDRBS3O75525 346 aaKnown RBP11.66□□□□□ -0.54
SNF8-206ENST00000509989 TIPRLO75663 272 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 NGFP01138 241 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 GAAP10253 952 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 MSR1P21757 451 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 CCNOP22674 350 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 PYCR1P32322 319 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 RPS6KA3P51812 740 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 CBX1P83916 185 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 KRTAP1-1Q07627 177 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNF8-206ENST00000509989 EFNB3Q15768 340 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 SPATA46Q5T0L3 261 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 CORO6Q6QEF8 472 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 IQCF1Q8N6M8 205 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 NPEPL1Q8NDH3 523 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 OR52E2Q8NGJ4 325 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 TRMT61AQ96FX7 289 aaKnown RBP11.66□□□□□ -0.54
SNF8-206ENST00000509989 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 COX4I2Q96KJ9 171 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 FEVQ99581 238 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
SNF8-206ENST00000509989 TPK1Q9H3S4 243 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 CCNB1IP1Q9NPC3 277 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 KRCC1Q9NPI7 259 aaPredicted RBP11.66□□□□□ -0.54
SNF8-206ENST00000509989 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
SNF8-206ENST00000509989 IL20Q9NYY1 176 aa11.66□□□□□ -0.54
SNF8-206ENST00000509989 ABCA1O95477 2261 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 A0A096LNT2 108 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 LYNX1G3V0Z9 82 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 TMCC2O75069 709 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 LY6G6DO95868 133 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 TFP02787 698 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 INHBBP09529 407 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 LYNX1P0DP58 116 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 CLUP10909 449 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 APEHP13798 732 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 ANOS1P23352 680 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 PAX7P23759 505 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 STOMP27105 288 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 NOS3P29474 1203 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 RPS27P42677 84 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 CENPAP49450 140 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 HSF2Q03933 536 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 CCDC92Q53HC0 331 aaPredicted RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 RASSF6Q6ZTQ3 369 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 RFPL4BQ6ZWI9 263 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 PAPD5Q8NDF8 572 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 ICA1LQ8NDH6 482 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 OR51L1Q8NGJ5 315 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 OR9Q1Q8NGQ5 310 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 TSSK6Q9BXA6 273 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 HCAR1Q9BXC0 346 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 DGCR6LQ9BY27 220 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 LRMDAQ9H2I8 198 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 CDH20Q9HBT6 801 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 MRPL22Q9NWU5 206 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 PDP1Q9P0J1 537 aaPredicted RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 LHFPL6Q9Y693 200 aa11.65□□□□□ -0.54
SNF8-206ENST00000509989 FN1P02751 2386 aaKnown RBP11.65□□□□□ -0.54
SNF8-206ENST00000509989 NF1P21359 2839 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 B9A039 149 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 RER1O15258 196 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 GYPBP06028 91 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 ADRA2AP08913 450 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 DBHP09172 617 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 GLRXP35754 106 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 IFNGR2P38484 337 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 MPV17P39210 176 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 NUDT6P53370 316 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 GLO1Q04760 184 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 RAB35Q15286 201 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 LINC00346Q8IVM7 164 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 GLB1L2Q8IW92 636 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 SLC37A3Q8NCC5 494 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 IL17RDQ8NFM7 739 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 FNDC8Q8TC99 324 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 MED20Q9H944 212 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 TBC1D23Q9NUY8 699 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 ASH2LQ9UBL3 628 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 CMAHPQ9Y471 501 aa11.64□□□□□ -0.55
SNF8-206ENST00000509989 IQCMA0A1B0GVH7 501 aa11.63□□□□□ -0.55
SNF8-206ENST00000509989 TVP23AA6NH52 213 aa11.63□□□□□ -0.55
SNF8-206ENST00000509989 AHCYL1O43865 530 aa11.63□□□□□ -0.55
SNF8-206ENST00000509989 STAMBPO95630 424 aa11.63□□□□□ -0.55
SNF8-206ENST00000509989 SNAP29O95721 258 aa11.63□□□□□ -0.55
SNF8-206ENST00000509989 LCKP06239 509 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms