RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 C5orf63A6NC05 138 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 OR6C68A6NDL8 312 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 TRIM64A6NGJ6 449 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 TRIM64BA6NI03 449 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF726A6NNF4 738 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CENPBD1B2RD01 187 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 M0R129 80 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 OR10H3O60404 316 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 TIPRLO75663 272 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 KRT33AO76009 404 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 LY6HO94772 140 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 OR6A2O95222 327 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CCL2P13500 99 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF35P13682 527 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 PAX1P15863 534 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CBR1P16152 277 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF32P17041 273 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 PTAFRP25105 342 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 LAP3P28838 519 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 SDHAP31040 664 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 RBMXP38159 391 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CLRN1P58418 232 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 PRPS1P60891 318 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ADAM8P78325 824 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 MRPS34P82930 218 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CBX1P83916 185 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 PIGFQ07326 219 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CD47Q08722 323 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ADIPOQQ15848 244 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 MEP1BQ16820 701 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 RFX4Q33E94 735 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 Q5PR19 223 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CLEC12AQ5QGZ9 265 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 FDX2Q6P4F2 183 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 SPNS3Q6ZMD2 512 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 RFPL4BQ6ZWI9 263 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 SPATA24Q86W54 205 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 CDK20Q8IZL9 346 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 NPEPL1Q8NDH3 523 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 AKR7LQ8NHP1 331 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEM171Q8WVE6 324 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 FBXW5Q969U6 566 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 DGCR6LQ9BY27 220 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 NUAK2Q9H093 628 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ESRP2Q9H6T0 727 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 SMURF2Q9HAU4 748 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 OBP2BQ9NPH6 170 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 POLE4Q9NR33 117 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 MRPL22Q9NWU5 206 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 AURKCQ9UQB9 309 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 LAMP3Q9UQV4 416 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 ARID1AO14497 2285 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 FN1P02751 2386 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 NAV3Q8IVL0 2385 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 HTR3EA5X5Y0 456 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ARPC3O15145 178 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ARHGEF9O43307 516 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 MITFO75030 526 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CCNB2O95067 398 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TFP02787 698 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST1H2ABP04908 130 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CLUP10909 449 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CD79AP11912 226 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 APEHP13798 732 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ITGA2P17301 1181 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FSTP19883 344 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 PRKACGP22612 351 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 EPHA2P29317 976 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TTKP33981 857 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 THBS4P35443 961 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 RPL4P36578 427 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 RPS27P42677 84 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 UBE2NP61088 152 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 PSG4Q00888 419 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TGFBR3Q03167 851 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CHRNB3Q05901 458 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SNTB2Q13425 540 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CRMP1Q14194 572 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TAF11Q15544 211 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 MICAQ29983 383 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 GSG1Q2KHT4 349 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 KRTAP27-1Q3LI81 207 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ANKDD1AQ495B1 522 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 PABPC1L2AQ5JQF8 200 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 LINC01590Q5TEZ4 76 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM205BPQ63HN1 556 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 KRT80Q6KB66 452 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FAHD1Q6P587 224 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC22A25Q6T423 547 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEM108Q6UXF1 575 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 DPY19L2P2Q6ZN68 376 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 RASSF6Q6ZTQ3 369 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST3H2AQ7L7L0 130 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ABHD12BQ7Z5M8 362 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 LRP11Q86VZ4 500 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF101Q8IZC7 436 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 OR6V1Q8N148 313 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms