RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PPP2R2BQ00005 443 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 CDK5Q00535 292 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 CRMP1Q14194 572 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SNAPC1Q16533 368 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 KCNMB1Q16558 191 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 OR6V1Q8N148 313 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SLC37A3Q8NCC5 494 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 GJC3Q8NFK1 279 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 OR2AJ1Q8NGZ0 328 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 OR4Q3Q8NH05 313 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SMAP2Q8WU79 429 aaPredicted RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 EME1Q96AY2 570 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 CIB1Q99828 191 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 PKP2Q99959 881 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 ZNF416Q9BWM5 594 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 OR2H1Q9GZK4 316 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 FN3KQ9H479 309 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 ZNF442Q9H7R0 627 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SRA1Q9HD15 236 aaKnown RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 CA10Q9NS85 328 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 BEX4Q9NWD9 120 aaPredicted RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 USE1Q9NZ43 259 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 ZNF224Q9NZL3 707 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 EIF3KQ9UBQ5 218 aaKnown RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 TEX15Q9BXT5 2789 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PDZD2O15018 2839 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ERICH4A6NGS2 130 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ATP6V1G2-DDX39BF2Z307 99 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 SURF4O15260 269 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PRODHO43272 600 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 SGCEO43556 437 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 DOK2O60496 412 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 TP53P04637 393 aaPredicted RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 MMP7P09237 267 aaPredicted RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 ZNF32P17041 273 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 TUBG1P23258 451 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 STOMP27105 288 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PCSK6P29122 969 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 APOBEC3AP31941 199 aaPredicted RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 RAD52P43351 418 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 FABP6P51161 128 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 TEKQ02763 1124 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ECH1Q13011 328 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 DAG1Q14118 895 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ENDOGQ14249 297 aaKnown RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 RAB39AQ14964 217 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PTGES3Q15185 160 aaKnown RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 ETFDHQ16134 617 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PABPC1L2AQ5JQF8 200 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 SLC35D3Q5M8T2 416 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 LCN1P1Q5VSP4 162 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 MUC15Q8N387 334 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 IQCF1Q8N6M8 205 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 CYB561A3Q8NBI2 242 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 SLC26A10Q8NG04 563 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 OR6K6Q8NGW6 343 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 C11orf40Q8WZ69 217 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 OTULINQ96BN8 352 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 FBXO17Q96EF6 278 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 COG8Q96MW5 612 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 RDH12Q96NR8 316 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 TSSK2Q96PF2 358 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 GABARAPL3Q9BY60 117 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 BCL2L14Q9BZR8 327 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 HDHD2Q9H0R4 259 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 VCXQ9H320 206 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ELOVL3Q9HB03 270 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 NOX3Q9HBY0 568 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 TUBG2Q9NRH3 451 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 CBLN4Q9NTU7 201 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 PLEK2Q9NYT0 353 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 H2AFY2Q9P0M6 372 aaPredicted RBP7.93□□□□□ -1.14
NUP54-207ENST00000508583 ASH2LQ9UBL3 628 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 GPR160Q9UJ42 338 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 NAV2Q8IVL1 2488 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 CSMD1Q96PZ7 3565 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 DSCAMO60469 2012 aa7.93□□□□□ -1.14
NUP54-207ENST00000508583 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 OR6C6A6NF89 314 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ZAR1LA6NP61 321 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 H0YHG0 523 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 H3BSA7 217 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 J3QW42 95 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 EI24O14681 340 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SMPD2O60906 423 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 GLCEO94923 617 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ATE1O95260 518 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 PLAUP00749 431 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ALPLP05186 524 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ERCC1P07992 297 aaPredicted RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 IGFBP1P08833 259 aaPredicted RBP7.92□□□□□ -1.14
NUP54-207ENST00000508583 CELA3BP08861 270 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 PATE4P0C8F1 98 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 GAAP10253 952 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 ZNF35P13682 527 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 SPI1P17947 270 aa7.92□□□□□ -1.14
NUP54-207ENST00000508583 NR4A1P22736 598 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms