RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 METTL17Q9H7H0 456 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 AP3M1Q9Y2T2 418 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ADAM18Q9Y3Q7 739 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 TRAV20A0A0B4J274 112 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 A0A1W2PPL8 197 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 CLDN25C9JDP6 229 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 PNPP00491 289 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 MT-ND5P03915 603 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 SCG5P05408 212 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 COX4I1P13073 169 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 MSR1P21757 451 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 GCH1P30793 250 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 GSK3BP49841 420 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF81P51508 661 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 PCBD1P61457 104 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 TEKQ02763 1124 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 MVKQ03426 396 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 IFI44LQ53G44 452 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 TBPL2Q6SJ96 375 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 C1orf229Q6ZS94 237 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 MBOAT2Q6ZWT7 520 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 TSEN54Q7Z6J9 526 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 RNF113BQ8IZP6 322 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 ABHD4Q8TB40 342 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 G6PC2Q9NQR9 355 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 POLE4Q9NR33 117 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 DECR2Q9NUI1 292 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 EIF3KQ9UBQ5 218 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 GRIP1Q9Y3R0 1128 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 WIPI2Q9Y4P8 454 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 TIMM10BQ9Y5J6 103 aa11.05□□□□□ -0.64
HMGCS1-205ENST00000508319 PLSCR5A0PG75 271 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 H3BSA7 217 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 TPD52L2O43399 206 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 SPRY3O43610 288 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 UBOX5O94941 541 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 SERPINA1P01009 418 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 NGFP01138 241 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 ADH4P08319 380 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 PPP1CBP62140 327 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 HFEQ30201 348 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 MESTQ5EB52 335 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 UNQ6126/PRO20091Q6UXV3 157 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF730Q6ZMV8 503 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 FAM122BQ7Z309 247 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 ALDH16A1Q8IZ83 802 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 SEMA6DQ8NFY4 1073 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 RAB39BQ96DA2 213 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 ELMOD3Q96FG2 381 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 ARHGAP32A7KAX9 2087 aa11.04□□□□□ -0.64
HMGCS1-205ENST00000508319 GSTA4O15217 222 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 VENTXO95231 258 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 AVPP01185 164 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 IGHV2-5P01817 119 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 CD14P08571 375 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 CTLA4P16410 223 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 HNRNPA0Q13151 305 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 ZBED5Q49AG3 693 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 SPRNQ5BIV9 151 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 ACSM5Q6NUN0 579 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 HACD2Q6Y1H2 254 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 TMPRSS11FQ6ZWK6 438 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 FKBP9P1Q75LS8 142 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 SYT9Q86SS6 491 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 C1orf174Q8IYL3 243 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC7A13Q8TCU3 470 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 Q96M85 177 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 HOPXQ9BPY8 73 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 ANKRD19PQ9H560 264 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 MSL2Q9HCI7 577 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 CYSLTR2Q9NS75 346 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 ABCD2Q9UBJ2 740 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 GRHPRQ9UBQ7 328 aa11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 NDRG4Q9ULP0 352 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-205ENST00000508319 LOC105371242A0A075B767 164 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 A0A0A6YYJ9 748 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 TEX13CA0A0J9YWL9 993 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 PRSS37A4D1T9 235 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 C12orf71A8MTZ7 269 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 PLPP2O43688 288 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 DOK2O60496 412 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 MPZL1O95297 269 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 ABHD16AO95870 558 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 CD55P08174 381 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 COX5BP10606 129 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 ANPEPP15144 967 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 NCK1P16333 377 aa11.02□□□□□ -0.65
HMGCS1-205ENST00000508319 RPL4P36578 427 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms