RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PCDHB10Q9UN67 800 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 TDRD6O60522 2096 aaKnown RBP12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 OR2F2O95006 317 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 CYB5AP00167 134 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 CLPSP04118 112 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 RNH1P13489 461 aaKnown RBP12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 BDKRB2P30411 391 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 FGL1Q08830 312 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 PMPCAQ10713 525 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 OR2F1Q13607 317 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF345Q14585 488 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 EMC4Q5J8M3 183 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF321PQ8N8H1 164 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ASB5Q8WWX0 329 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 CMKLR1Q99788 373 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 RTN4RQ9BZR6 473 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 COMMD9Q9P000 198 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF175Q9Y473 711 aa12.09□□□□□ -0.47
SNCAIP-209ENST00000508017 LRP4O75096 1905 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SIGLEC6O43699 453 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 HOXC4P09017 264 aaPredicted RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC25A4P12235 298 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 HPGDP15428 266 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 CASRP41180 1078 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SNTB1Q13884 538 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 PARGQ86W56 976 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC37A2Q8TED4 501 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 NKD1Q969G9 470 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 MRGPRFQ96AM1 343 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 MRPL22Q9NWU5 206 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC39A1Q9NY26 324 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 OBP2AQ9NY56 170 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SPEGQ15772 3267 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 A0A1W2PQF6 199 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 WIPF3A6NGB9 483 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SULT2B1O00204 365 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SULT1C2O00338 296 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 LMX1BO60663 402 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ATG12O94817 140 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ADCYAP1P18509 176 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 AVPR2P30518 371 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SPOCK1Q08629 439 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 FUT7Q11130 342 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC22A6Q4U2R8 563 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 UNQ6126/PRO20091Q6UXV3 157 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ZNF679Q8IYX0 411 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 ACBD4Q8NC06 268 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 RNF128Q8TEB7 428 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 CST11Q9H112 138 aa12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 MYOZ1Q9NP98 299 aaPredicted RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 PRMT8Q9NR22 394 aaPredicted RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 FBXO9Q9UK97 447 aaPredicted RBP12.08□□□□□ -0.48
SNCAIP-209ENST00000508017 DISC1C4P0D8 188 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 ZNF264O43296 627 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 CD74P04233 296 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 NTSR1P30989 418 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 CTAG1AP78358 180 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 TOMM34Q15785 309 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 STK11Q15831 433 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 PAN3Q58A45 887 aaKnown RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 TEX30Q5JUR7 227 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 PRAMEF17Q5VTA0 474 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 ACOT7LQ6ZUV0 252 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 PRR22Q8IZ63 422 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC25A44Q96H78 314 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 TSNAXQ99598 290 aaKnown RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 UBQLN4Q9NRR5 601 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 TMED7Q9Y3B3 224 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 F5H0A9 414 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 PHYHO14832 338 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 SLC16A7O60669 478 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 DCNP07585 359 aaKnown RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 HOXB2P14652 356 aa12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 IGFBP3P17936 291 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-209ENST00000508017 ZBTB25P24278 435 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms