RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 ZNF771Q7L3S4 317 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 ALDH16A1Q8IZ83 802 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 CLDN22Q8N7P3 220 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 OR8J3Q8NGG0 315 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 ABHD4Q8TB40 342 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 NANPQ8TBE9 248 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 GAL3ST1Q99999 423 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 C7orf69Q9H7B7 122 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 HIF3AQ9Y2N7 669 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 TIMM10BQ9Y5J6 103 aa11.35□□□□□ -0.59
POLR2J3-212ENST00000507355 ISPDA4D126 451 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 HMGB1P1B2RPK0 211 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 FXYD1O00168 92 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 NPPAP01160 153 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 IFNA14P01570 189 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 HKR1P10072 659 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 NR2C1P13056 603 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 IFI30P13284 250 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 KDELR2P33947 212 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 LIPAP38571 399 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 GUCA1AP43080 201 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 RPL27P61353 136 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 LCN2P80188 198 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 SLC3A1Q07837 685 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ST3GAL3Q11203 375 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 CYBRD1Q53TN4 286 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ZNF774Q6NX45 483 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ERICH5Q6P6B1 374 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 C1orf174Q8IYL3 243 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 TPD52L3Q96J77 140 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 C4orf45Q96LM5 186 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 TMEM120AQ9BXJ8 343 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ELOVL3Q9HB03 270 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 MSL2Q9HCI7 577 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 CYSLTR2Q9NS75 346 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 UBAP1Q9NZ09 502 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 A4GNTQ9UNA3 340 aa11.34□□□□□ -0.59
POLR2J3-212ENST00000507355 LOC100653049A0A140TA62 436 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 A0A1W2PPL8 197 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 MRASO14807 208 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 KRT34O76011 436 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 PRSS23O95084 383 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 ADH4P08319 380 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 FUT4P22083 530 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 GATA3P23771 443 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 PCBD1P61457 104 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 KLF10Q13118 480 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 HNRNPA0Q13151 305 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 LRRC23Q53EV4 343 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 TREML1Q86YW5 311 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 OR51A7Q8NH64 312 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 ST7LQ8TDW4 575 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 GEMIN6Q8WXD5 167 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 DCLRE1CQ96SD1 692 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 OPN4Q9UHM6 478 aa11.33□□□□□ -0.6
POLR2J3-212ENST00000507355 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 IGHMP01871 453 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 SCG5P05408 212 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 SBK2P0C263 348 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 FPR2P25090 351 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 IFNA8P32881 189 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 RBMXP38159 391 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 ARHGDIAP52565 204 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 SELENOWP63302 87 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 SF3A3Q12874 501 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 PSG7Q13046 419 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 COQ5Q5HYK3 327 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 ARL9Q6T311 187 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 MICU2Q8IYU8 434 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 PRRC1Q96M27 445 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 DIRC2Q96SL1 478 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 NTN4Q9HB63 628 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 DCAF16Q9NXF7 216 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
POLR2J3-212ENST00000507355 TRAV27A0A087WT01 109 aa11.31□□□□□ -0.6
POLR2J3-212ENST00000507355 DNAJC9-AS1A6NH13 148 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms