RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SHQ1Q6PI26 577 aaKnown RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 UNQ6126/PRO20091Q6UXV3 157 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 Q6ZS46 218 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 FOXL2NBQ6ZUU3 175 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 MUC15Q8N387 334 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 SLC30A7Q8NEW0 376 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 NUP37Q8NFH4 326 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 OR2T33Q8NG76 320 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 OR52E2Q8NGJ4 325 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 OR4K13Q8NH42 304 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 TEX47Q8TBZ9 253 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 NABP1Q96AH0 204 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 DUS3LQ96G46 650 aaKnown RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 ZNF75AQ96N20 296 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 NMNAT3Q96T66 252 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 NUAK2Q9H093 628 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 SYT4Q9H2B2 425 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CXXC4Q9H2H0 198 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 POLE4Q9NR33 117 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 CBLN4Q9NTU7 201 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 TBC1D23Q9NUY8 699 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 VNN3Q9NY84 501 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 ZNF224Q9NZL3 707 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 KLHL21Q9UJP4 597 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 FBXO9Q9UK97 447 aaPredicted RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 B9D1Q9UPM9 204 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
GYPB-206ENST00000506516 UGT2A1Q9Y4X1 527 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 TIMM10BQ9Y5J6 103 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 PDZD2O15018 2839 aa6.3□□□□□ -1.4
GYPB-206ENST00000506516 MPDZO75970 2070 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ANKHD1Q8IWZ3 2542 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 ATP6V1G2-DDX39BF2Z307 99 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 G3V2T6 193 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 BHLHE40O14503 412 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 HMGN1P05114 100 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 SOD3P08294 240 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 CELA3BP08861 270 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 MMP7P09237 267 aaPredicted RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZNF35P13682 527 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 OSMP13725 252 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PAX1P15863 534 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 CTLA4P16410 223 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZNF32P17041 273 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PRKACGP22612 351 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 NR4A1P22736 598 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 POU1F1P28069 291 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 CALCRP30988 508 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 SERPINF1P36955 418 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 RAD52P43351 418 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ACTR3P61158 418 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 LSM6P62312 80 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 PSG4Q00888 419 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 GLO1Q04760 184 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.29□□□□□ -1.45e-6■□□□□ 10.7
GYPB-206ENST00000506516 SCRN3Q0VDG4 424 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 CCNIQ14094 377 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 RAB35Q15286 201 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ATP6AP1Q15904 470 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PGGHGQ32M88 737 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 SLC36A3Q495N2 470 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 FREM1Q5H8C1 2179 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PABPC1L2AQ5JQF8 200 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 SLC27A4Q6P1M0 643 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZFP1Q6P2D0 407 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ARL9Q6T311 187 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PRSS57Q6UWY2 283 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PTCHD4Q6ZW05 846 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 YTHDF3Q7Z739 585 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 TMEM179BQ7Z7N9 219 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 HIPK1Q86Z02 1210 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 LNX2Q8N448 690 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 SDR9C7Q8NEX9 313 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 OR10H5Q8NGA6 315 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 OR5K1Q8NHB7 308 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 FGFBP3Q8TAT2 258 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 DNAJC9Q8WXX5 260 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 HTRA1Q92743 480 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 FBXO17Q96EF6 278 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 PERPQ96FX8 193 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 NIPSNAP1Q9BPW8 284 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 TRAF4Q9BUZ4 470 aaPredicted RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 CDADC1Q9BWV3 514 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZNF442Q9H7R0 627 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 NTN4Q9HB63 628 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 CDH20Q9HBT6 801 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 RPRD1BQ9NQG5 326 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 CA10Q9NS85 328 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZNF701Q9NV72 531 aaPredicted RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 KIF17Q9P2E2 1029 aa6.29□□□□□ -1.4
GYPB-206ENST00000506516 EIF3KQ9UBQ5 218 aaKnown RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
GYPB-206ENST00000506516 FKBP7Q9Y680 259 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms