RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	SAMHD1	Q9Y3Z3	626 aa	Known RBP	9.07	□□□□□ -0.96
FXR1-222	ENST00000498658	ARFGEF3	Q5TH69	2177 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	RNF223	E7ERA6	249 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658		H7C1C5	153 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658		M0R233	179 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	GNGT2	O14610	69 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	SMAD7	O15105	426 aa	Known RBP	9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	SYNGR3	O43761	229 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	PPP1R3D	O95685	299 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	MT-ND5	P03915	603 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	HEXA	P06865	529 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	COX5B	P10606	129 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	TUBG1	P23258	451 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	UCP2	P55851	309 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	FXYD6P3	P58550	94 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	LCN6	P62502	163 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	PSG4	Q00888	419 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	GLO1	Q04760	184 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	COX10	Q12887	443 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	BNIP1	Q12981	228 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	AQP6	Q13520	282 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	FLOT2	Q14254	428 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	MICA	Q29983	383 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF620	Q6ZNG0	422 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	RASSF6	Q6ZTQ3	369 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	SVOPL	Q8N434	492 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	AQP11	Q8NBQ7	271 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	OR10H5	Q8NGA6	315 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	OR4C15	Q8NGM1	316 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	IPCEF1	Q8WWN9	437 aa	Predicted RBP	9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	HTRA1	Q92743	480 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	CLPTM1L	Q96KA5	538 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	CHID1	Q9BWS9	393 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	OR2H1	Q9GZK4	316 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	MMADHC	Q9H3L0	296 aa	Predicted RBP	9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	ELOVL3	Q9HB03	270 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	TUBG2	Q9NRH3	451 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	SLCO1C1	Q9NYB5	712 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	BAIAP2	Q9UQB8	552 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658	CDH10	Q9Y6N8	788 aa		9.06	□□□□□ -0.96
FXR1-222	ENST00000498658		A0A1W2PPW3	197 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	LOC390937	A0A1W2PQ73	354 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	TMEM129	A0AVI4	362 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	C5orf49	A4QMS7	147 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ARRDC5	A6NEK1	342 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658		H3BSA7	217 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	GPRIN2	O60269	458 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ICMT	O60725	284 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CST1	P01037	141 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	GAST	P01350	101 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	TP53	P04637	393 aa	Predicted RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	LCK	P06239	509 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	FAM157B	P0CG42	384 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CTLA4	P16410	223 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CCNO	P22674	350 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	APEX1	P27695	318 aa	Known RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CDKN2A	P42771	156 aa	Known RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	PDLIM4	P50479	330 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ARHGDIA	P52565	204 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ENDOG	Q14249	297 aa	Known RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	KCNMB1	Q16558	191 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	SLC36A3	Q495N2	470 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF770	Q6IQ21	691 aa	Predicted RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	LEG1	Q6P5S2	330 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	SPATA24	Q86W54	205 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ADGRG5	Q8IZF4	528 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CIART	Q8N365	385 aa	Predicted RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF525	Q8N782	197 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	CPEB3	Q8NE35	698 aa	Known RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	SYNPR	Q8TBG9	265 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	POM121L2	Q96KW2	1035 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	SAMD8	Q96LT4	415 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	COG8	Q96MW5	612 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	SORCS2	Q96PQ0	1159 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF416	Q9BWM5	594 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	DGCR6L	Q9BY27	220 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	MRPL37	Q9BZE1	423 aa	Known RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	NUAK2	Q9H093	628 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	RACGAP1	Q9H0H5	632 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	RERGL	Q9H628	205 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	IL20	Q9NYY1	176 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	REV1	Q9UBZ9	1251 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	DUSP13	Q9UII6	198 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	POMP	Q9Y244	141 aa		9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	COA3	Q9Y2R0	106 aa	Predicted RBP	9.05	□□□□□ -0.96
FXR1-222	ENST00000498658	GSC2	O15499	205 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	SGCE	O43556	437 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	ADRA2A	P08913	450 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	CCL2	P13500	99 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF250	P15622	560 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	HIST1H1C	P16403	213 aa	Known RBP	9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	GCH1	P30793	250 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	LIPA	P38571	399 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	CENPA	P49450	140 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	KLF3	P57682	345 aa	Predicted RBP	9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	LOXL1	Q08397	574 aa	Predicted RBP	9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	NKPD1	Q17RQ9	610 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	ZNF718	Q3SXZ3	478 aa		9.04	□□□□□ -0.96
FXR1-222	ENST00000498658	CD300LD	Q6UXZ3	194 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms