RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IGFBP2P18065 325 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 CAPGP40121 348 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 AQP4P55087 323 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 TUBA1BP68363 451 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 TUBA4AP68366 448 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 TEKQ02763 1124 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 APOFQ13790 326 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 SLC36A2Q495M3 483 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 SLC35D3Q5M8T2 416 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 TUBA1AQ71U36 451 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.49■□□□□ 0.39
CTSD-206ENST00000497544 FAM222BQ8WU58 562 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 ZNRF4Q8WWF5 429 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 C11orf40Q8WZ69 217 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 NABP1Q96AH0 204 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 TMUB1Q9BVT8 246 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 CDADC1Q9BWV3 514 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 C1QTNF6Q9BXI9 259 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 RASSF4Q9H2L5 321 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 HEATR1Q9H583 2144 aaKnown RBP17.49■□□□□ 0.39
CTSD-206ENST00000497544 EMC7Q9NPA0 242 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 CCNB1IP1Q9NPC3 277 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 NGBQ9NPG2 151 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 POLR1DQ9Y2S0 133 aa17.49■□□□□ 0.39
CTSD-206ENST00000497544 C12orf71A8MTZ7 269 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 PRODHO43272 600 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 MPZL2O60487 215 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 UBL3O95164 117 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 HLA-HP01893 362 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 SCG5P05408 212 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 THBDP07204 575 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 CST2P09228 141 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 LSM6P62312 80 aaKnown RBP17.48■□□□□ 0.39
CTSD-206ENST00000497544 RAB1AP62820 205 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 ADARB1P78563 741 aaKnown RBP17.48■□□□□ 0.39
CTSD-206ENST00000497544 PIGFQ07326 219 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 SNCBQ16143 134 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 KCNMB1Q16558 191 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 NXNL2Q5VZ03 156 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 TMEM53Q6P2H8 277 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 UGT2A3Q6UWM9 527 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 BCDIN3DQ7Z5W3 292 aaKnown RBP17.48■□□□□ 0.39
CTSD-206ENST00000497544 ZNF511Q8NB15 262 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 BBS1Q8NFJ9 593 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 SLC26A10Q8NG04 563 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 WACQ9BTA9 647 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 CRIM1Q9NZV1 1036 aa17.48■□□□□ 0.39
CTSD-206ENST00000497544 ACANP16112 2415 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 TVP23AA6NH52 213 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 TFP02787 698 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 HRGP04196 525 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 PATE4P0C8F1 98 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 CD99P14209 185 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 GSTT1P30711 240 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 ARR3P36575 388 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 PCBD1P61457 104 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 SNRPGP62308 76 aaKnown RBP17.47■□□□□ 0.39
CTSD-206ENST00000497544 IL5RAQ01344 420 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 MEP1BQ16820 701 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 GSG1Q2KHT4 349 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 LINC01590Q5TEZ4 76 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 LCN1P1Q5VSP4 162 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 AADACL4Q5VUY2 407 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 OTPQ5XKR4 325 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 IZUMO2Q6UXV1 221 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 MEPCEQ7L2J0 689 aaKnown RBP17.47■□□□□ 0.39
CTSD-206ENST00000497544 GID4Q8IVV7 300 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 SETD9Q8NE22 299 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 FGFBP3Q8TAT2 258 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 TEAD3Q99594 435 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 ZNF416Q9BWM5 594 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 MOV10Q9HCE1 1003 aaKnown RBP17.47■□□□□ 0.39
CTSD-206ENST00000497544 CLN6Q9NWW5 311 aa17.47■□□□□ 0.39
CTSD-206ENST00000497544 TMCC2O75069 709 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 CLIC3O95833 236 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 GAAP10253 952 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 CBR1P16152 277 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 SLC2A5P22732 501 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 SSTR2P30874 369 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 HSPA13P48723 471 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 ADAM8P78325 824 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 IL18R1Q13478 541 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 ENDOGQ14249 297 aaKnown RBP17.46■□□□□ 0.39
CTSD-206ENST00000497544 MEDAGQ5VYS4 303 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 SYT9Q86SS6 491 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 MDP1Q86V88 176 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 ACBD4Q8NC06 268 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 OR2AJ1Q8NGZ0 328 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 ZMYND19Q96E35 227 aaPredicted RBP17.46■□□□□ 0.39
CTSD-206ENST00000497544 FBXO17Q96EF6 278 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 B3GNT2Q9NY97 397 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 TIMM10BQ9Y5J6 103 aa17.46■□□□□ 0.39
CTSD-206ENST00000497544 SLC22A31A6NKX4 558 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 SNTNA6NMZ2 147 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 RAB36O95755 333 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF32P17041 273 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 CRYGSP22914 178 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 ZNF83P51522 516 aa17.45■□□□□ 0.38
CTSD-206ENST00000497544 CDH11P55287 796 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms