RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SGCAQ16586 387 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 LAIR2Q6ISS4 152 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 KLHL24Q6TFL4 600 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 SLC16A14Q7RTX9 510 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 SKA3Q8IX90 412 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 OR2T27Q8NH04 317 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 OTOSQ8NHW6 89 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 ASB17Q8WXJ9 295 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 MUCL1Q96DR8 90 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 CNN2Q99439 309 aaKnown RBP17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 C1orf198Q9H425 327 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 RERGLQ9H628 205 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 WDR76Q9H967 626 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 ADGRL4Q9HBW9 690 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 FGF20Q9NP95 211 aaPredicted RBP17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 SCN3BQ9NY72 215 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 NDRG3Q9UGV2 375 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 TPRKBQ9Y3C4 175 aa17.27■□□□□ 0.36
SCAMP3-209ENST00000497470 GOSR1O95249 250 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 HLA-DQA2P01906 255 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 MMP7P09237 267 aaPredicted RBP17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 EPXP11678 715 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 B4GALT1P15291 398 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CBR1P16152 277 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CDAP32320 146 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 NUDT6P53370 316 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ADAM8P78325 824 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 RNLSQ5VYX0 342 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 TMEM53Q6P2H8 277 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 DEGS2Q6QHC5 323 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 BCDIN3DQ7Z5W3 292 aaKnown RBP17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CDC20BQ86Y33 519 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 WDR31Q8NA23 367 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ZNF511Q8NB15 262 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CNIH3Q8TBE1 160 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ZMYND19Q96E35 227 aaPredicted RBP17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CNBD2Q96M20 576 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ZNF416Q9BWM5 594 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CDADC1Q9BWV3 514 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ACTR6Q9GZN1 396 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 DUSP21Q9H596 190 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 CCNB1IP1Q9NPC3 277 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 FKBP14Q9NWM8 211 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 ZNF224Q9NZL3 707 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 PSORS1C1Q9UIG5 152 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 SLC25A15Q9Y619 301 aa17.26■□□□□ 0.35
SCAMP3-209ENST00000497470 FAM90A27PA6NNH2 459 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 ZNF593O00488 134 aaPredicted RBP17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 RAD51DO75771 328 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 IGKV3-15P01624 115 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 IGFBP2P18065 325 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 ALOX5APP20292 161 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 CCKARP32238 428 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 SRSF1Q07955 248 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 ECH1Q13011 328 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 SLC18B1Q6NT16 456 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 ALDH16A1Q8IZ83 802 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 IL17RDQ8NFM7 739 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 OR51L1Q8NGJ5 315 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 OR2AJ1Q8NGZ0 328 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 RNFT2Q96EX2 444 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 MRPL48Q96GC5 212 aaKnown RBP17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 DACH2Q96NX9 599 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 NGBQ9NPG2 151 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 LHFPL6Q9Y693 200 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 DOPEY1Q5JWR5 2465 aa17.25■□□□□ 0.35
SCAMP3-209ENST00000497470 IGHA1P01876 353 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 SCG5P05408 212 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 DCTDP32321 178 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 CDSNQ15517 529 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 GSG1Q2KHT4 349 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 KCTD20Q7Z5Y7 419 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 HAVCR2Q8TDQ0 301 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 S100PBPQ96BU1 408 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 LGALS12Q96DT0 336 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 FBXO17Q96EF6 278 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 ZNF75AQ96N20 296 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 HDHD2Q9H0R4 259 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 UBAP1Q9NZ09 502 aa17.24■□□□□ 0.35
SCAMP3-209ENST00000497470 UBR5O95071 2799 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 NKX2-6A6NCS4 301 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 TRIM64A6NGJ6 449 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 FAM171A2A8MVW0 826 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 SLC1A7O00341 560 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 MPZL1O95297 269 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 IGLV1-44P01699 117 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 CRHBPP24387 322 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 ATP6V1E1P36543 226 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 CAPZA2P47755 286 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 GABARAPL2P60520 117 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 SLC35A2P78381 396 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 ROM1Q03395 351 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 EGR3Q06889 387 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 KCTD18Q6PI47 426 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 DPY19L4Q7Z388 723 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 ERI1Q8IV48 349 aaKnown RBP17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 ACBD7Q8N6N7 88 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 ST7LQ8TDW4 575 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 NIPAL2Q9H841 368 aa17.23■□□□□ 0.35
SCAMP3-209ENST00000497470 DDX28Q9NUL7 540 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms