RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 MRPL24Q96A35 216 aaKnown RBP12.38□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 TSPAN32Q96QS1 320 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 FOXB1Q99853 325 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 ALG12Q9BV10 488 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 MRPL37Q9BZE1 423 aaKnown RBP12.38□□□□□ -0.43
CXCL12-208ENST00000496375 DNAJB9Q9UBS3 223 aa12.38□□□□□ -0.43
CXCL12-208ENST00000496375 A6NIZ1 184 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 LYNX1G3V0Z9 82 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 AHCYL1O43865 530 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
CXCL12-208ENST00000496375 CIB2O75838 187 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 CCNB2O95067 398 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 LYNX1P0DP58 116 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 NR2C1P13056 603 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF35P13682 527 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
CXCL12-208ENST00000496375 ACTR3P61158 418 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 RAP1BP61224 184 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 RAP1AP62834 184 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 RIN1Q13671 783 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 SNCBQ16143 134 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 GPR139Q6DWJ6 353 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 RPL13AP3Q6NVV1 102 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 LRFN4Q6PJG9 635 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 SMARCD3Q6STE5 483 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 DPY19L2P2Q6ZN68 376 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
CXCL12-208ENST00000496375 NRBF2Q96F24 287 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 SNX18Q96RF0 628 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 IL20Q9NYY1 176 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 ZNF346Q9UL40 294 aaKnown RBP12.37□□□□□ -0.43
CXCL12-208ENST00000496375 SPEF1Q9Y4P9 236 aa12.37□□□□□ -0.43
CXCL12-208ENST00000496375 IMPA2O14732 288 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 ARPC3O15145 178 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 SYNGR3O43761 229 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 DEAF1O75398 565 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-208ENST00000496375 RAB36O95755 333 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 GASTP01350 101 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 SDHAP31040 664 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 GLRXP35754 106 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 GIPRP48546 466 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 EVX1P49640 407 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 RAB1AP62820 205 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 TRIP10Q15642 601 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 RFX4Q33E94 735 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 FANK1Q8TC84 345 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 HPS1Q92902 700 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 SYT3Q9BQG1 590 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 OR52D1Q9H346 318 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 DENND2DQ9H6A0 471 aaPredicted RBP12.36□□□□□ -0.43
CXCL12-208ENST00000496375 NTN4Q9HB63 628 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 REV1Q9UBZ9 1251 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 ADAM18Q9Y3Q7 739 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 U3KQV3 271 aa12.36□□□□□ -0.43
CXCL12-208ENST00000496375 M0R233 179 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 DHHO43323 396 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 UBL3O95164 117 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 GSTM3P21266 225 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 SLC6A6P31641 620 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 CLRN1P58418 232 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 ERVK-25P63136 954 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 GALK2Q01415 458 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 COX10Q12887 443 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 PPP1R8Q12972 351 aaKnown RBP12.35□□□□□ -0.43
CXCL12-208ENST00000496375 RAB39AQ14964 217 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 ATP6AP1Q15904 470 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 MESTQ5EB52 335 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 FOXL2NBQ6ZUU3 175 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 TMEM179BQ7Z7N9 219 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 ADCK1Q86TW2 530 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 LRP11Q86VZ4 500 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 AQP11Q8NBQ7 271 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 OR10G2Q8NGC3 310 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 GIPC3Q8TF64 312 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 MYEF2Q9P2K5 600 aaKnown RBP12.35□□□□□ -0.43
CXCL12-208ENST00000496375 FZR1Q9UM11 496 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 AP4S1Q9Y587 144 aa12.35□□□□□ -0.43
CXCL12-208ENST00000496375 IDH3BO43837 385 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 ENTPD5O75356 428 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 TIPRLO75663 272 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 QDPRP09417 244 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 FCGR1AP12314 374 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 RPL4P36578 427 aaKnown RBP12.34□□□□□ -0.43
CXCL12-208ENST00000496375 ALDH3B1P43353 468 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 RPS6KA3P51812 740 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 CDH15P55291 814 aa12.34□□□□□ -0.43
CXCL12-208ENST00000496375 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
CXCL12-208ENST00000496375 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms