RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 FRMD6Q96NE9 622 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF385AQ96PM9 386 aaKnown RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF700Q9H0M5 742 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 WDR54Q9H977 334 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 TCF7L1Q9HCS4 588 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 C19orf25Q9UFG5 118 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SPATA2Q9UM82 520 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 AIPO00170 330 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TRAF3IP2O43734 574 aaPredicted RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 IGHMP01871 453 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TACSTD2P09758 323 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RBMS1P29558 406 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TALDO1P37837 337 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CLDN20P56880 219 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 IFITM2Q01629 132 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RIN1Q13671 783 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SWI5Q1ZZU3 235 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 YRDCQ86U90 279 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 MISPQ8IVT2 679 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 FADS6Q8N9I5 356 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 OR52I2Q8NH67 350 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 HES7Q9BYE0 225 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 DEPPQ9NTK1 212 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TAS2R4Q9NYW5 299 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF319Q9P2F9 582 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 PRELID1Q9Y255 219 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF407Q9C0G0 2248 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 P2RY10O00398 339 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RER1O15258 196 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 GPRIN2O60269 458 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CD59P13987 128 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CSRP1P21291 193 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CFL1P23528 166 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CDK2P24941 298 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 GIFP27352 417 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 INPP1P49441 399 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 EGR3Q06889 387 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RAET1LQ5VY80 246 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SFRP4Q6FHJ7 346 aaPredicted RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SLC18B1Q6NT16 456 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 PLET1Q6UQ28 207 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 DHRS13Q6UX07 377 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RAB11FIP2Q7L804 512 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 LINGO2Q7L985 606 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RPS19BP1Q86WX3 136 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TMEM156Q8N614 296 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF248Q8NDW4 579 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 OR52N5Q8NH56 324 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 RNF128Q8TEB7 428 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 SLC7A6Q92536 515 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 MRGPRX4Q96LA9 322 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 CMKLR1Q99788 373 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 MRPL13Q9BYD1 178 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ZMAT3Q9HA38 289 aaKnown RBP9.25□□□□□ -0.93
SAMM50-206ENST00000494795 G6PC2Q9NQR9 355 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 ATMQ13315 3056 aa9.25□□□□□ -0.93
SAMM50-206ENST00000494795 TRBV5-7A0A0A0MS05 114 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 C9J4A7 227 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ORC5O43913 435 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF254O75437 659 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ACP1P24666 158 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 PTH2RP49190 550 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 SPOCK1Q08629 439 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 Q5BKY6 102 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 TEX30Q5JUR7 227 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 BCL2L15Q5TBC7 163 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 TMEM225Q6GV28 225 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 DND1Q8IYX4 353 aaKnown RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 MCHR2Q969V1 340 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 SPACA5Q96QH8 159 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 DDX28Q9NUL7 540 aaKnown RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 NUDT15Q9NV35 164 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 OTOGLQ3ZCN5 2332 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 DCDC2BA2VCK2 349 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 OR2M5A3KFT3 312 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ETV2O00321 342 aaPredicted RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 TNFSF11O14788 317 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF208O43345 1280 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 NAGAP17050 411 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 FOLR3P41439 243 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 TMED10P49755 219 aaKnown RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 PLA1AQ53H76 456 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ATP1A1-AS1Q5TC04 95 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 SPINK14Q6IE38 97 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 C3orf33Q6P1S2 294 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 PLCZ1Q86YW0 608 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 RNF170Q96K19 258 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 NEK6Q9HC98 313 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 ALKBH4Q9NXW9 302 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 LHFPL6Q9Y693 200 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 SPTBN2O15020 2390 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 DNAJC13O75165 2243 aa9.24□□□□□ -0.93
SAMM50-206ENST00000494795 RIF1Q5UIP0 2472 aaKnown RBP9.24□□□□□ -0.93
SAMM50-206ENST00000494795 HTR3EA5X5Y0 456 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms