RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ACOT11Q8WXI4 607 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 C11orf40Q8WZ69 217 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 RASD2Q96D21 266 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 FAM46AQ96IP4 442 aaKnown RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 LRRC37BQ96QE4 947 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 FNDC11Q9BVV2 318 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 G6PC2Q9NQR9 355 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 POLE4Q9NR33 117 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SLCO1C1Q9NYB5 712 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 STX18Q9P2W9 335 aaKnown RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 CMYA5Q8N3K9 4069 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 DOCK11Q5JSL3 2073 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SPRY3O43610 288 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ICMTO60725 284 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 RGS9O75916 674 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-208ENST00000494728 VENTXO95231 258 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 PTHP01270 115 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 IGHV2-5P01817 119 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 MSR1P21757 451 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 CRYBB2P43320 205 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 LIMS1P48059 325 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 GDI2P50395 445 aaKnown RBP9.88□□□□□ -0.83
VTI1A-208ENST00000494728 NUDT2P50583 147 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF81P51508 661 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 PPP1CBP62140 327 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 SEC23BQ15437 767 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 TAF11Q15544 211 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 PCGF3Q3KNV8 242 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF730Q6ZMV8 503 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 TMPRSS11FQ6ZWK6 438 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 OAFQ86UD1 273 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 FAM156AQ8NDB6 213 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 SLC7A6Q92536 515 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 METTL17Q9H7H0 456 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF665Q9H7R5 613 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 SAP30LQ9HAJ7 183 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 NMNAT1Q9HAN9 279 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-208ENST00000494728 MSL2Q9HCI7 577 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 NKIRAS2Q9NYR9 191 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 ABCD2Q9UBJ2 740 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 IL20RAQ9UHF4 553 aa9.88□□□□□ -0.83
VTI1A-208ENST00000494728 LOC105371242A0A075B767 164 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 TRBV4-1A0A0J9YWV2 114 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 TCF21O43680 179 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 UBOX5O94941 541 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 DIRAS1O95057 198 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 GPANK1O95872 356 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 DRD4P21917 467 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 MDH1P40925 334 aaKnown RBP9.87□□□□□ -0.83
VTI1A-208ENST00000494728 SELENOVP59797 346 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
VTI1A-208ENST00000494728 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 RFLNBQ8N5W9 214 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 OR51F2Q8NH61 342 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 GPA33Q99795 319 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 MYLK2Q9H1R3 596 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 LRMDAQ9H2I8 198 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 EGFL7Q9UHF1 273 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 ENPP4Q9Y6X5 453 aa9.87□□□□□ -0.83
VTI1A-208ENST00000494728 TEX13CA0A0J9YWL9 993 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 A6NIZ1 184 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 CLDN25C9JDP6 229 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 GSTA4O15217 222 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 TPD52L2O43399 206 aaKnown RBP9.86□□□□□ -0.83
VTI1A-208ENST00000494728 PLPP2O43688 288 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 MPZL1O95297 269 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 PNPP00491 289 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 CD14P08571 375 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 NR2C1P13056 603 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 ADRA2CP18825 462 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 RPL4P36578 427 aaKnown RBP9.86□□□□□ -0.83
VTI1A-208ENST00000494728 OMPP47874 163 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 RAP1BP61224 184 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 RAP1AP62834 184 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 PSG7Q13046 419 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 KRR1Q13601 381 aaKnown RBP9.86□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF718Q3SXZ3 478 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 ZBED5Q49AG3 693 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 FAM209AQ5JX71 171 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 HACD2Q6Y1H2 254 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 Q6ZR03 302 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 PTCHD4Q6ZW05 846 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-208ENST00000494728 RNF148Q8N7C7 305 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 FAM162AQ96A26 154 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 C7orf34Q96L11 122 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF570Q96NI8 536 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 RBP7Q96R05 134 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 KCTD14Q9BQ13 255 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-208ENST00000494728 FUZQ9BT04 418 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 TMPRSS13Q9BYE2 586 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 SYT4Q9H2B2 425 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 KCNN2Q9H2S1 579 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 DECR2Q9NUI1 292 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 NDUFAF4Q9P032 175 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms