RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 RPL36Q9Y3U8 105 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CCL27Q9Y4X3 112 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 POLR3HQ9Y535 204 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 DMRT1Q9Y5R6 373 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 WIF1Q9Y5W5 379 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FN1P02751 2386 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 USF3Q68DE3 2245 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TEX13CA0A0J9YWL9 993 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GNG14A0A1W2PPG7 69 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GXYLT2A0PJZ3 443 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CD8B2A6NJW9 211 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 A6NNC1 897 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 HMSDA8MTL9 139 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 FADS1O60427 444 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PLOD3O60568 738 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TPST2O60704 377 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 RGS11O94810 467 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 RLN2P04090 185 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 HEXAP06865 529 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ANXA4P09525 319 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GIPP09681 153 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 HSD3B1P14060 373 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 DRD2P14416 443 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 HPGDP15428 266 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CPEP16870 476 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 VAMP1P23763 118 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PAX6P26367 422 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 HSD3B2P26439 372 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 FGF9P31371 208 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TIMP3P35625 211 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 MC3RP41968 323 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CLDN18P56856 261 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TSPAN5P62079 268 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 SNRPGP62308 76 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PRR20EP86478 221 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PRR20CP86479 221 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PRR20DP86480 221 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PRR20BP86481 221 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PRR20AP86496 221 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PSG6Q00889 435 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ACSM2AQ08AH3 577 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 C2orf80Q0P641 193 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PTGR1Q14914 329 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TRAM2Q15035 370 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 C4orf46Q504U0 113 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PAN3Q58A45 887 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TMEM201Q5SNT2 666 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ACSM2BQ68CK6 577 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 DHRS7BQ6IAN0 325 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 APOOLQ6UXV4 268 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 C17orf107Q6ZR85 190 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CDC20BQ86Y33 519 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GCNT2Q8N0V5 402 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 SPICQ8N5J4 248 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 OR11H7Q8NGC8 314 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 OR56B4Q8NH76 319 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 OR14L1PQ8NHC6 308 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 NANPQ8TBE9 248 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ORAI1Q96D31 301 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 SLC35A4Q96G79 324 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TMEM68Q96MH6 324 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 SFXN2Q96NB2 322 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 RHNO1Q9BSD3 238 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 FAIM2Q9BWQ8 316 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PAPOLGQ9BWT3 736 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 POLDIP3Q9BY77 421 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 BCL2L14Q9BZR8 327 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 DPY30Q9C005 99 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GLIPR2Q9H4G4 154 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ANKRD19PQ9H560 264 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ESRP2Q9H6T0 727 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TXNL4BQ9NX01 149 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CLCF1Q9UBD9 225 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ASH2LQ9UBL3 628 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 GIMAP2Q9UG22 337 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 CORO2BQ9UQ03 480 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 RPH3AQ9Y2J0 694 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 LSM2Q9Y333 95 aaKnown RBP7.3□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF780BQ9Y6R6 833 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 JMJD1CQ15652 2540 aa7.3□□□□□ -1.24
HDAC6-234ENST00000493923 TRBV5-3A0A0A0MS03 114 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SERTM1A2A2V5 107 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 RAB19A4D1S5 217 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 NAP1L6A6NFF2 107 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 EEF1E1-BLOC1S5C9J1V9 151 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GPR171O14626 319 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 DVL2O14641 736 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 IMPA2O14732 288 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SIAH2O43255 324 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 EEF1E1O43324 174 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 RGS14O43566 566 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SSNA1O43805 119 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 KRT33AO76009 404 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF682O95780 498 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms