RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ESPNLQ6ZVH7 1005 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 ADAMTS14Q8WXS8 1223 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 MCHR2Q969V1 340 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 PPP1R14BQ96C90 147 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 SFXN2Q96NB2 322 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 SF3B5Q9BWJ5 86 aaKnown RBP12.49□□□□□ -0.41
PTPN7-216ENST00000492977 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 POLE4Q9NR33 117 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
PTPN7-216ENST00000492977 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 TRAPPC6AO75865 159 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 APOA1P02647 267 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 QDPRP09417 244 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 IL7P13232 177 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 ELK1P19419 428 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 NPR2P20594 1047 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
PTPN7-216ENST00000492977 TALDO1P37837 337 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 PSMD7P51665 324 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 CARD18P57730 90 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 SCN1BQ07699 218 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 OR1C1Q15619 314 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 KCNMB1Q16558 191 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 BAK1Q16611 211 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 OR7E24Q6IFN5 339 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 OR2M7Q8NG81 312 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 OR9K2Q8NGE7 335 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 TRMT10AQ8TBZ6 339 aaKnown RBP12.48□□□□□ -0.41
PTPN7-216ENST00000492977 RNF133Q8WVZ7 376 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
PTPN7-216ENST00000492977 SIGLEC12Q96PQ1 595 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 IRF2BPLQ9H1B7 796 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 TCF7L1Q9HCS4 588 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 B4GALT7Q9UBV7 327 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 AK6Q9Y3D8 172 aaKnown RBP12.48□□□□□ -0.41
PTPN7-216ENST00000492977 R4GMQ9 66 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 WDFY3Q8IZQ1 3526 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 MED12Q93074 2177 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
PTPN7-216ENST00000492977 A0A087WV48 116 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 WDPCPO95876 746 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 PNPP00491 289 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 F10P00742 488 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SLC2A2P11168 524 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 ATF1P18846 271 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 ENPP1P22413 925 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 AZGP1P25311 298 aaKnown RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 DCTDP32321 178 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SPATC1Q76KD6 591 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 RHOUQ7L0Q8 258 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SYT9Q86SS6 491 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 GGNQ86UU5 652 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 LINC00346Q8IVM7 164 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 IL17RDQ8NFM7 739 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 CMTM3Q96MX0 182 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 MRI1Q9BV20 369 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 C1orf198Q9H425 327 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 V9GY05 133 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 KIAA1549Q9HCM3 1950 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 FUOMA2VDF0 154 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 AIPO00170 330 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 CSF3P09919 207 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 MAGEB1P43366 347 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SOX2P48431 317 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 CSNK1A1P48729 337 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 BCAP31P51572 246 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SUCLG1P53597 346 aaKnown RBP12.47□□□□□ -0.41
PTPN7-216ENST00000492977 RRADP55042 308 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 GFRA1P56159 465 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 CLDN20P56880 219 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SOX8P57073 446 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 IL18Q14116 193 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 STAC2Q6ZMT1 411 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 RDH10Q8IZV5 341 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SRXN1Q9BYN0 137 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
PTPN7-216ENST00000492977 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms