RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 KNG1P01042 644 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 WNT2P09544 360 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 THRBP10828 461 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ACADSP16219 412 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 GPX2P18283 190 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ERFP50548 548 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ZNF84P51523 738 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ARMC4Q5T2S8 1044 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ASPHD2Q6ICH7 369 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 CLDN22Q8N7P3 220 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 ITLN1Q8WWA0 313 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 HDAC2Q92769 488 aaKnown RBP11.07□□□□□ -0.64
USF1-206ENST00000491629 SAMD8Q96LT4 415 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 KCNK9Q9NPC2 374 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 CYSLTR2Q9NS75 346 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 C1RLQ9NZP8 487 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 SLC7A7Q9UM01 511 aa11.07□□□□□ -0.64
USF1-206ENST00000491629 TRAV40A0A0B4J280 105 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 SCG5P05408 212 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 TSPAN19P0C672 248 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 SLC6A2P23975 617 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 LIPAP38571 399 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 AQP2P41181 271 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 MTNR1AP48039 350 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 MRPL19P49406 292 aaKnown RBP11.06□□□□□ -0.64
USF1-206ENST00000491629 GDI2P50395 445 aaKnown RBP11.06□□□□□ -0.64
USF1-206ENST00000491629 RAG2P55895 527 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 SGCAQ16586 387 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 OLFML2AQ68BL7 652 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 TTC33Q6PID6 262 aaPredicted RBP11.06□□□□□ -0.64
USF1-206ENST00000491629 SLC25A47Q6Q0C1 308 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 NANOGNBQ7Z5D8 188 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 HIPK4Q8NE63 616 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 MOSPD2Q8NHP6 518 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 ZNF607Q96SK3 696 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 MMP27Q9H306 513 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 CCNB1IP1Q9NPC3 277 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 EIF3KQ9UBQ5 218 aaKnown RBP11.06□□□□□ -0.64
USF1-206ENST00000491629 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.06□□□□□ -0.64
USF1-206ENST00000491629 ZNF281Q9Y2X9 895 aa11.06□□□□□ -0.64
USF1-206ENST00000491629 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 IGHV2-70DA0A0C4DH43 119 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 CENPBD1B2RD01 187 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 SRRM5B3KS81 715 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 TMEM178BH3BS89 294 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 H3BSA7 217 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 ZNF205O95201 554 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 CD247P20963 164 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 LAP3P28838 519 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 MDH2P40926 338 aaKnown RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 CRYBA2P53672 197 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 ESCO2Q56NI9 601 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 DLEU7Q6UYE1 221 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 MREGQ8N565 214 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 ANKRD42Q8N9B4 389 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 OR2Z1Q8NG97 314 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 OR10S1Q8NGN2 331 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 PFN4Q8NHR9 129 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 VANGL1Q8TAA9 524 aaPredicted RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 NSMAFQ92636 917 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 CCT8L2Q96SF2 557 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 CHIAQ9BZP6 476 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 MARCH7Q9H992 704 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 BEX1Q9HBH7 125 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 TMEM165Q9HC07 324 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 C20orf141Q9NUB4 165 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 CGGBP1Q9UFW8 167 aaPredicted RBP11.05□□□□□ -0.64
USF1-206ENST00000491629 LRCH1Q9Y2L9 728 aa11.05□□□□□ -0.64
USF1-206ENST00000491629 A0A1B0GUS0 222 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 A0A1W2PRG6 482 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 TRAPPC13A5PLN9 417 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 M0QX08 132 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
USF1-206ENST00000491629 ERLIN1O75477 346 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SERPINB7O75635 380 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SASH3O75995 380 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 NDUFA7O95182 113 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 TSPAN15O95858 294 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 UMPSP11172 480 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SELEP16581 610 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 FUT1P19526 365 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 MMP16P51512 607 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SELPLGQ14242 412 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 ENDOGQ14249 297 aaKnown RBP11.04□□□□□ -0.64
USF1-206ENST00000491629 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 Q6YL49 198 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 C17orf107Q6ZR85 190 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 NKAIN4Q8IVV8 208 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms