RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 LAMP5Q9UJQ1 280 aa11.63□□□□□ -0.55
SNX12-205ENST00000490561 FBXL3Q9UKT7 428 aa11.63□□□□□ -0.55
SNX12-205ENST00000490561 NBEAQ8NFP9 2946 aa11.63□□□□□ -0.55
SNX12-205ENST00000490561 POLEQ07864 2286 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 ARPC4-TTLL3A0A0A6YYG9 625 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 J3QRE1 110 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 SELENOFO60613 162 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 UBL3O95164 117 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 IGHA1P01876 353 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 CDK1P06493 297 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 MRPL3P09001 348 aaKnown RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 SPARCP09486 303 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 ARR3P36575 388 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 CD79BP40259 229 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 UBE2NP61088 152 aaKnown RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 ST3GAL4Q11206 333 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 GABRA6Q16445 453 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 TMEM53Q6P2H8 277 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 NCCRP1Q6ZVX7 275 aaPredicted RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 PRSS48Q7RTY5 328 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 CXorf67Q86X51 503 aaPredicted RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 OR10H4Q8NGA5 316 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 CA5BP1Q8WTZ4 195 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
SNX12-205ENST00000490561 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 ZNF416Q9BWM5 594 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 EMC7Q9NPA0 242 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 CYB5R1Q9UHQ9 305 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 AMDHD2Q9Y303 409 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 PCDHGB5Q9Y5G0 923 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 SNX5Q9Y5X3 404 aa11.62□□□□□ -0.55
SNX12-205ENST00000490561 DAPL1A0PJW8 107 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 LYZL6O75951 148 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 GPANK1O95872 356 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 WNT11O96014 354 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 LYNP07948 512 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 PPP3CBP16298 524 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 ACTA2P62736 377 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 ACTG2P63267 376 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 EGR3Q06889 387 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 ENDOGQ14249 297 aaKnown RBP11.61□□□□□ -0.55
SNX12-205ENST00000490561 MEP1BQ16820 701 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 TBRG1Q3YBR2 411 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 C9orf135Q5VTT2 229 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 KCTD18Q6PI47 426 aaPredicted RBP11.61□□□□□ -0.55
SNX12-205ENST00000490561 B3GLCTQ6Y288 498 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 RHOUQ7L0Q8 258 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 DPY19L4Q7Z388 723 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.61□□□□□ -0.55
SNX12-205ENST00000490561 LIX1LQ8IVB5 337 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 SVOPQ8N4V2 548 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 HAVCR2Q8TDQ0 301 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 CDCA4Q9BXL8 241 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 C1orf198Q9H425 327 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 KCNJ16Q9NPI9 418 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 TIMM10BQ9Y5J6 103 aa11.61□□□□□ -0.55
SNX12-205ENST00000490561 FAM208BQ5VWN6 2430 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 A0A087WXM4 84 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 MAGEA13PA6NCF6 341 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 RAD51DO75771 328 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 MPZL1O95297 269 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 SCG5P05408 212 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ALOX5APP20292 161 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 FOXG1P55316 489 aaPredicted RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 HIST1H3AP68431 136 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ECH1Q13011 328 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 MRPL28Q13084 256 aaKnown RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 EIF2B1Q14232 305 aaKnown RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 TIMM23BQ5SRD1 257 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 HIST2H3PS2Q5TEC6 136 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ZNF773Q6PK81 442 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 DEGS2Q6QHC5 323 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 TMPRSS11AQ6ZMR5 421 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 STAC2Q6ZMT1 411 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 PLEKHG7Q6ZR37 379 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 HIST2H3AQ71DI3 136 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 KCTD20Q7Z5Y7 419 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 SKA3Q8IX90 412 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ALDH16A1Q8IZ83 802 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 PIAS4Q8N2W9 510 aaPredicted RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 SH3GL3Q99963 347 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 HDHD2Q9H0R4 259 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 RNF121Q9H920 327 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 SLC17A5Q9NRA2 495 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 ATPIF1Q9UII2 106 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
SNX12-205ENST00000490561 ERGIC3Q9Y282 383 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 LHFPL6Q9Y693 200 aa11.6□□□□□ -0.55
SNX12-205ENST00000490561 A0A096LPE4 126 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms