RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MRPS22P82650 360 aaKnown RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 ANKRD26P1Q6NSI1 321 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 ZFP1Q6P2D0 407 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 KDELC1Q6UW63 502 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 NIPA1Q7RTP0 329 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 PPP1R42Q7Z4L9 355 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 EIF1ADQ8N9N8 165 aaKnown RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 CXorf40AQ8TE69 158 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 MRGPRFQ96AM1 343 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 SERPINB12Q96P63 405 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 CAMK2N2Q96S95 79 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 SLC39A3Q9BRY0 314 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 CRACR2AQ9BSW2 395 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 OR52D1Q9H346 318 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 DDX19AQ9NUU7 478 aaKnown RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 TMED5Q9Y3A6 229 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 IKBKGQ9Y6K9 419 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 ARHGEF35A5YM69 484 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 LGALS9O00182 355 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 CLPXO76031 633 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 SERPIND1P05546 499 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 RND2P52198 227 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 PLP1P60201 277 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 YWHAGP61981 247 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC39-206ENST00000489868 RCAN2Q14206 197 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 PRSS58Q8IYP2 241 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 MIR7-3HGQ8N6C7 128 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 OR6N1Q8NGY5 312 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 PIFOQ8TCI5 191 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 C17orf50Q8WW18 174 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 PIBF1Q8WXW3 757 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 DUS3LQ96G46 650 aaKnown RBP2.41□□□□□ -2.02
CCDC39-206ENST00000489868 ZNF488Q96MN9 340 aa2.41□□□□□ -2.02
CCDC39-206ENST00000489868 IGLV1-36A0A0B4J1U3 117 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 EEDO75530 441 aaKnown RBP2.4□□□□□ -2.03
CCDC39-206ENST00000489868 CLIC3O95833 236 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 IL4P05112 153 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF250P15622 560 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF43P17038 809 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 RAB3BP20337 219 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 DTYMKP23919 212 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 IFNA8P32881 189 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SSTR5P35346 364 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 CRYBB2P43320 205 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SSR4P51571 173 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 ACTR1AP61163 376 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 TWF1Q12792 350 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 CDH17Q12864 832 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SLC39A6Q13433 755 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 TGFBIQ15582 683 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 LRRC23Q53EV4 343 aaPredicted RBP2.4□□□□□ -2.03
CCDC39-206ENST00000489868 BRD3OSQ6XYD6 125 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SLC16A13Q7RTY0 426 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 CALHM3Q86XJ0 350 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 CDKL3Q8IVW4 592 aaPredicted RBP2.4□□□□□ -2.03
CCDC39-206ENST00000489868 TUBGCP3Q96CW5 907 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SEH1LQ96EE3 360 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 PKNOX2Q96KN3 472 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 ETNK2Q9NVF9 386 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 IKZF2Q9UKS7 526 aa2.4□□□□□ -2.03
CCDC39-206ENST00000489868 SCN1AP35498 2009 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 ANKRD12Q6UB98 2062 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 C5orf63A6NC05 138 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 H0YJW9 148 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 DYNC1I1O14576 645 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 CXCL11O14625 94 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 CD74P04233 296 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 CCNB1P14635 433 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 CEACAM3P40198 252 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 BST1Q10588 318 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 ANKDD1AQ495B1 522 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 ORMDL2Q53FV1 153 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 UNQ9165/PRO28630Q6UXU0 137 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 WDFY1Q8IWB7 410 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 RSPH1Q8WYR4 309 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 TIMM17AQ99595 171 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 SULT4A1Q9BR01 284 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF717Q9BY31 904 aaPredicted RBP2.39□□□□□ -2.03
CCDC39-206ENST00000489868 FGF20Q9NP95 211 aaPredicted RBP2.39□□□□□ -2.03
CCDC39-206ENST00000489868 SUN2Q9UH99 717 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF229Q9UJW7 825 aa2.39□□□□□ -2.03
CCDC39-206ENST00000489868 AHDC1Q5TGY3 1603 aaPredicted RBP2.39□□□□□ -2.03
CCDC39-206ENST00000489868 IGHV1OR15-9A0A0B4J2B8 117 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF716A6NP11 495 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 CDC7O00311 574 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 TSPAN13O95857 204 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 PTMAP06454 111 aaKnown RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 MX1P20591 662 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 GPX4P36969 197 aaPredicted RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 CCNHP51946 323 aaPredicted RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 BST2Q10589 180 aaKnown RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 THEM4Q5T1C6 240 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 CENPPQ6IPU0 288 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 SLC38A10Q9HBR0 1119 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 FBXO6Q9NRD1 293 aaPredicted RBP2.38□□□□□ -2.03
CCDC39-206ENST00000489868 HYPKQ9NX55 129 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms