RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FBXO17Q96EF6 278 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 RBM4Q9BWF3 364 aaKnown RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF416Q9BWM5 594 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 GSX2Q9BZM3 304 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 NMNAT2Q9BZQ4 307 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 OR2H1Q9GZK4 316 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 LIME1Q9H400 295 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 CA10Q9NS85 328 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 KRT84Q9NSB2 600 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ZNF701Q9NV72 531 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 COA3Q9Y2R0 106 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-212ENST00000489728 ATP23Q9Y6H3 246 aa9.6□□□□□ -0.87
CPSF7-212ENST00000489728 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 OVOL3O00110 214 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 DCTN6O00399 190 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 SMPD2O60906 423 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 NR4A1P22736 598 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 CALCRP30988 508 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 APLNRP35414 380 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 FABP6P51161 128 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 DAPP51397 102 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 CRISP1P54107 249 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 PPP2R2BQ00005 443 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 PSG4Q00888 419 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 GALK2Q01415 458 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 CRMP1Q14194 572 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 RAB39AQ14964 217 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 EFNB3Q15768 340 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 ETFDHQ16134 617 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 PABPC1L2AQ5JQF8 200 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 B3GLCTQ6Y288 498 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 MUC15Q8N387 334 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 NEUROG1Q92886 237 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 STMN2Q93045 179 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 RBM4BQ9BQ04 359 aaKnown RBP9.59□□□□□ -0.87
CPSF7-212ENST00000489728 TRAF4Q9BUZ4 470 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-212ENST00000489728 CDH20Q9HBT6 801 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 S100A14Q9HCY8 104 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 CBLN4Q9NTU7 201 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 NDRG4Q9ULP0 352 aaKnown RBP9.59□□□□□ -0.87
CPSF7-212ENST00000489728 OAZ3Q9UMX2 235 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 ROS1P08922 2347 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
CPSF7-212ENST00000489728 DSCAMO60469 2012 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HEATR1Q9H583 2144 aaKnown RBP9.58□□□□□ -0.88
CPSF7-212ENST00000489728 AKAP6Q13023 2319 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 H3BSA7 217 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 J3QW42 95 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SURF4O15260 269 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 PRODHO43272 600 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SGCEO43556 437 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SOD3P08294 240 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 IGFBP1P08833 259 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-212ENST00000489728 PATE4P0C8F1 98 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 TUBG1P23258 451 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 IGFBP5P24593 272 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 STOMP27105 288 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 POU1F1P28069 291 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 GLRXP35754 106 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 EVX1P49640 407 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HIST1H3AP68431 136 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HGFACQ04756 655 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SNTB2Q13425 540 aaKnown RBP9.58□□□□□ -0.88
CPSF7-212ENST00000489728 DAG1Q14118 895 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 GINS1Q14691 196 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 TESK1Q15569 626 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HIST2H3PS2Q5TEC6 136 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 C11orf71Q6IPW1 123 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 ARL9Q6T311 187 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SPNS3Q6ZMD2 512 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HIST2H3AQ71DI3 136 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 PROKR2Q8NFJ6 384 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 GJC3Q8NFK1 279 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 OR10H5Q8NGA6 315 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 C11orf40Q8WZ69 217 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HTRA1Q92743 480 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 POM121L2Q96KW2 1035 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 PKP2Q99959 881 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 GABARAPL3Q9BY60 117 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 BCL2L14Q9BZR8 327 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 HDHD2Q9H0R4 259 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 FN3KQ9H479 309 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 RERGLQ9H628 205 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 SRA1Q9HD15 236 aaKnown RBP9.58□□□□□ -0.88
CPSF7-212ENST00000489728 EMC7Q9NPA0 242 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 TUBG2Q9NRH3 451 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 USE1Q9NZ43 259 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 ASH2LQ9UBL3 628 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 POLR1DQ9Y2S0 133 aa9.58□□□□□ -0.88
CPSF7-212ENST00000489728 OR6C6A6NF89 314 aa9.57□□□□□ -0.88
CPSF7-212ENST00000489728 ZAR1LA6NP61 321 aa9.57□□□□□ -0.88
CPSF7-212ENST00000489728 B9A039 149 aa9.57□□□□□ -0.88
CPSF7-212ENST00000489728 PRR23D1E9PI22 279 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-212ENST00000489728 H7C417 338 aa9.57□□□□□ -0.88
CPSF7-212ENST00000489728 TFP02787 698 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms