RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SIAEQ9HAT2 523 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 ELL3Q9HB65 397 aaPredicted RBP2.73□□□□□ -1.97
PRPF4-203ENST00000488937 CTPS2Q9NRF8 586 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 PRODH2Q9UF12 536 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 RARRES3Q9UL19 164 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 WDR81Q562E7 1941 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 MTCL1Q9Y4B5 1905 aaKnown RBP2.73□□□□□ -1.97
PRPF4-203ENST00000488937 KIAA0232Q92628 1395 aa2.73□□□□□ -1.97
PRPF4-203ENST00000488937 CACNA1FO60840 1977 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ABCB11O95342 1321 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 IGHV4-4A0A075B6R2 117 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 IGKV1D-8A0A087WSZ0 117 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 A0A0B4J2E0 115 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 A0A1B0GX12 115 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 A6NDN8 102 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PRAC2D3DTV9 90 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 LRRN3E7EW58 273 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SMKR1H3BMG3 65 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 FGF16O43320 207 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF749O43361 778 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 HCRTR1O43613 425 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PSIP1O75475 530 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 TRMUO75648 421 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 TNFAIP8O95379 198 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PPP1R3DO95685 299 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ORM1P02763 201 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 IFNA6P05013 189 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 HCKP08631 526 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 HOXC4P09017 264 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF35P13682 527 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 MARK3P27448 753 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 GSK3BP49841 420 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PLK1P53350 603 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 UGT2B15P54855 530 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 DLX5P56178 289 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 OR2B8PP59922 312 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ERVS71-1P61550 626 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SARNPP82979 210 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PUDPQ08623 228 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 TSPAN31Q12999 210 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 CASP8Q14790 479 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZNHIT3Q15649 155 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PSMD5Q16401 504 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 C17orf58Q2M2W7 97 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 NSUN5P1Q3KNT7 163 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PARP15Q460N3 678 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 COX19Q49B96 90 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 CPTPQ5TA50 214 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 FHL5Q5TD97 284 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 GFI1BQ5VTD9 330 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SDHAF4Q5VUM1 108 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 UFSP1Q6NVU6 142 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 NIPAL1Q6NVV3 410 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 Q6ZRP5 223 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 CREB3L2Q70SY1 520 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PTAR1Q7Z6K3 402 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 TMEM135Q86UB9 458 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZFAND4Q86XD8 727 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 HOGA1Q86XE5 327 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 STX12Q86Y82 276 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ACOT4Q8N9L9 421 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 HSD17B11Q8NBQ5 300 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 LFNGQ8NES3 379 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 OR5AR1Q8NGP9 310 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 OR2G2Q8NGZ5 317 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 OR5AK3PQ8NH89 298 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 RNASEH2CQ8TDP1 164 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 RNF138Q8WVD3 245 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SECTM1Q8WVN6 248 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 DNASE2BQ8WZ79 361 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 OR5P2Q8WZ92 322 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 FGF14Q92915 247 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 PSMG2Q969U7 264 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 YIPF6Q96EC8 236 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 B3GALT6Q96L58 329 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF354BQ96LW1 612 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 IL17FQ96PD4 163 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 MCCC1Q96RQ3 725 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 RANBP9Q96S59 729 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 CIB1Q99828 191 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 DCUN1D5Q9BTE7 237 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 BEX2Q9BXY8 128 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 TUBB1Q9H4B7 451 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 UBE2ZQ9H832 354 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ISYNA1Q9NPH2 558 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SAMSN1Q9NSI8 373 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 IL17CQ9P0M4 197 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SLC2A6Q9UGQ3 507 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 GNPTGQ9UJJ9 305 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 CFL2Q9Y281 166 aa2.72□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF256Q9Y2P7 627 aaPredicted RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 SAMHD1Q9Y3Z3 626 aaKnown RBP2.72□□□□□ -1.97
PRPF4-203ENST00000488937 NUP153P49790 1475 aaKnown RBP2.71□□□□□ -1.97
PRPF4-203ENST00000488937 FANCIQ9NVI1 1328 aa2.71□□□□□ -1.98
PRPF4-203ENST00000488937 ADGRL3Q9HAR2 1447 aa2.71□□□□□ -1.98
PRPF4-203ENST00000488937 TRAV8-7A0A075B6U6 113 aa2.71□□□□□ -1.98
PRPF4-203ENST00000488937 A8MX80 341 aa2.71□□□□□ -1.98
PRPF4-203ENST00000488937 SEC14L6B5MCN3 397 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms