RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NXF5Q9H1B4 397 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 FARSBQ9NSD9 589 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 GCNT4Q9P109 453 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 GSTK1Q9Y2Q3 226 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 MRPS18BQ9Y676 258 aaKnown RBP2.75□□□□□ -1.97
ITGB1-214ENST00000488427 WSB1Q9Y6I7 421 aa2.75□□□□□ -1.97
ITGB1-214ENST00000488427 PTPRJQ12913 1337 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 SDHDO14521 159 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 CCL4P13236 92 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 TPSB2P20231 275 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 FGF9P31371 208 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-214ENST00000488427 PLA2G16P53816 162 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 HSD17B7P56937 341 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 PRPS1P60891 318 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 CCL7P80098 99 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 LAMTOR4Q0VGL1 99 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 TPSAB1Q15661 275 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 DEFB133Q30KQ1 61 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 CHRFAM7AQ494W8 412 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 TIGITQ495A1 244 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 PAGE3Q5JUK9 113 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 MOB3BQ86TA1 216 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 TMEM135Q86UB9 458 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF429Q86V71 674 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 CCDC50Q8IVM0 306 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 MDS2Q8NDY4 140 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 OR51G1Q8NGK1 321 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 OR2T34Q8NGX1 318 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 RAPGEF5Q92565 580 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 OTUB2Q96DC9 234 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 SH3YL1Q96HL8 342 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-214ENST00000488427 C7orf34Q96L11 122 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 SLC17A9Q9BYT1 436 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 CXCL16Q9H2A7 254 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 GNG12Q9UBI6 72 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 HEATR5AQ86XA9 2040 aa2.74□□□□□ -1.97
ITGB1-214ENST00000488427 NUP210LQ5VU65 1888 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 CCDC88CQ9P219 2028 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 IGKV2D-24A0A075B6R9 120 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 TMEM150BA6NC51 233 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 A8MUI8 341 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 KIF2AO00139 706 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 CACNG3O60359 315 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 CTRLP40313 264 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 PPOXP50336 477 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 KPNA2P52292 529 aaKnown RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 PFN3P60673 137 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 RPS14P62263 151 aaKnown RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 IL1RL1Q01638 556 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 ASPHQ12797 758 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 TRIM16LQ309B1 348 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 CEP55Q53EZ4 464 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 ASPHD2Q6ICH7 369 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 BLOC1S2Q6QNY1 142 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 TMEM25Q86YD3 366 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 LINC01561Q8N1V8 128 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF433Q8N7K0 673 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 NKAPP1Q8N9T2 125 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 DENND6BQ8NEG7 585 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 OR51G2Q8NGK0 314 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 OR10T2Q8NGX3 314 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 SPPL2BQ8TCT7 592 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 SPRYD4Q8WW59 207 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 ST8SIA1Q92185 356 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 C12orf66Q96MD2 445 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 RASL11BQ9BPW5 248 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 DDA1Q9BW61 102 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 BOLA2Q9H3K6 86 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 LRRN3Q9H3W5 708 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 RHOJQ9H4E5 214 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 FN3KRPQ9HA64 309 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 EML4Q9HC35 981 aaKnown RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 FBXL12Q9NXK8 326 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 MTRF1LQ9UGC7 380 aaKnown RBP2.73□□□□□ -1.97
ITGB1-214ENST00000488427 SH3BGRL2Q9UJC5 107 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 ERVW-1Q9UQF0 538 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 BTRCQ9Y297 605 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 MFHAS1Q9Y4C4 1052 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 V9GY05 133 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 DSCAMO60469 2012 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 MED12Q93074 2177 aa2.73□□□□□ -1.97
ITGB1-214ENST00000488427 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 FAM166BA8MTA8 275 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 B4GALT5O43286 388 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 AQP9O43315 295 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PTBP3O95758 552 aaKnown RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 CMA1P23946 247 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 LONP1P36776 959 aaKnown RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 LEPP41159 167 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 GLP1RP43220 463 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 DAP3P51398 398 aaKnown RBP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 SLC7A9P82251 487 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
ITGB1-214ENST00000488427 PCM1Q15154 2024 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 NRF1Q16656 503 aa2.72□□□□□ -1.97
ITGB1-214ENST00000488427 UBE2SQ16763 222 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms