RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PARP12Q9H0J9 701 aaKnown RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 SLC38A10Q9HBR0 1119 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 ADAM28Q9UKQ2 775 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 DDX49Q9Y6V7 483 aaKnown RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 CAMTA1Q9Y6Y1 1673 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 A0A0B4J2A0 478 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 A0A1W2PPE3 182 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 A0A1W2PPV9 198 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 MAGEB3O15480 346 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 NOL3O60936 208 aaKnown RBP1.1□□□□□ -2.23
SMC4-219ENST00000487747 H6PDO95479 791 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 C1orf105O95561 183 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 RAB3DO95716 219 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 DBTP11182 482 aaKnown RBP1.1□□□□□ -2.23
SMC4-219ENST00000487747 IL1RNP18510 177 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 DTYMKP23919 212 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 PSMA5P28066 241 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 ATP1B3P54709 279 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 POLR2FP61218 127 aaKnown RBP1.1□□□□□ -2.23
SMC4-219ENST00000487747 ZNF92Q03936 586 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 IHHQ14623 411 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 STUMQ69YW2 141 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 ADNP2Q6IQ32 1131 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 FBXW12Q6X9E4 464 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 TMEM135Q86UB9 458 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 ZSCAN30Q86W11 494 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 PRSS58Q8IYP2 241 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 SCFD1Q8WVM8 642 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 HGDQ93099 445 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.1□□□□□ -2.232e-13■■■■■ 56.3
SMC4-219ENST00000487747 SYAP1Q96A49 352 aaPredicted RBP1.1□□□□□ -2.23
SMC4-219ENST00000487747 C10orf35Q96D05 121 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 RBM14Q96PK6 669 aaKnown RBP1.1□□□□□ -2.23
SMC4-219ENST00000487747 COPS8Q99627 209 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 MFFQ9GZY8 342 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 SHPKQ9UHJ6 478 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 CBY1Q9Y3M2 126 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 N6AMT1Q9Y5N5 214 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 AP1M2Q9Y6Q5 423 aa1.1□□□□□ -2.23
SMC4-219ENST00000487747 C3orf84H3BNL1 204 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 KLHL2O95198 593 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 C2P06681 752 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 OR8U9P0C7N5 309 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 NCK1P16333 377 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 CD1CP29017 333 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 SERPINB5P36952 375 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 UGT2B15P54855 530 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 FBXW4P57775 412 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 ARHGAP19Q14CB8 494 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 CCDC152Q4G0S7 254 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 CCDC92Q53HC0 331 aaPredicted RBP1.09□□□□□ -2.23
SMC4-219ENST00000487747 LHFPL3Q86UP9 236 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 CDKL3Q8IVW4 592 aaPredicted RBP1.09□□□□□ -2.23
SMC4-219ENST00000487747 LRRC75A-AS1Q8N1F1 130 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 SLC41A3Q96GZ6 507 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 TSGA13Q96PP4 275 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 CNN2Q99439 309 aaKnown RBP1.09□□□□□ -2.23
SMC4-219ENST00000487747 SH3GL1Q99961 368 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 TCHPQ9BT92 498 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 TRIM62Q9BVG3 475 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 PPA2Q9H2U2 334 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 ANKRD19PQ9H560 264 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 AZI2Q9H6S1 392 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 NMRAL1Q9HBL8 299 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 EPS15L1Q9UBC2 864 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 ATP6V0A2Q9Y487 856 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 LTBP2Q14767 1821 aa1.09□□□□□ -2.23
SMC4-219ENST00000487747 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
SMC4-219ENST00000487747 IGHV1OR15-9A0A0B4J2B8 117 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 CENPVL3A0A0U1RRI6 287 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 BICDL2A1A5D9 508 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 SNTNA6NMZ2 147 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 CCL21O00585 134 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 SPAG6O75602 509 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 TSPAN12O95859 305 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 HRES1P13985 223 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 HSD17B2P37059 387 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 MAGEA8P43361 318 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 PPIL2Q13356 520 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 PDK3Q15120 406 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 ATAD3BQ5T9A4 648 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 EFL1Q7Z2Z2 1120 aaKnown RBP1.08□□□□□ -2.24
SMC4-219ENST00000487747 PIFOQ8TCI5 191 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 WDR34Q96EX3 536 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 TTC25Q96NG3 672 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 PANX2Q96RD6 677 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 P2RX4Q99571 388 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 RHOXF2Q9BQY4 288 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 ERP44Q9BS26 406 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 TMEM43Q9BTV4 400 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 POLE4Q9NR33 117 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 CGNQ9P2M7 1197 aaKnown RBP1.08□□□□□ -2.24
SMC4-219ENST00000487747 ENOPH1Q9UHY7 261 aa1.08□□□□□ -2.24
SMC4-219ENST00000487747 PTBP2Q9UKA9 531 aaKnown RBP1.08□□□□□ -2.24
SMC4-219ENST00000487747 CLRN2A0PK11 232 aa1.07□□□□□ -2.24
SMC4-219ENST00000487747 TIMM8AO60220 97 aaPredicted RBP1.07□□□□□ -2.24
SMC4-219ENST00000487747 EIF3GO75821 320 aaKnown RBP eCLIP1.07□□□□□ -2.248e-13■■■■■ 59.2
SMC4-219ENST00000487747 WARSP23381 471 aaKnown RBP1.07□□□□□ -2.24
SMC4-219ENST00000487747 SSTR5P35346 364 aa1.07□□□□□ -2.24
SMC4-219ENST00000487747 GZMMP51124 257 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms