RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CLDN25C9JDP6 229 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SRSF10O75494 262 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 GATBO75879 557 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SERPINA3P01011 423 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 UCHL1P09936 223 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 CDAP32320 146 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 HNRNPA0Q13151 305 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SLC10A1Q14973 349 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 YIF1BQ5BJH7 314 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ZMAT1Q5H9K5 638 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 FAM27D1Q5T7N8 215 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 DEGS2Q6QHC5 323 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 CEACAM19Q7Z692 300 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 KRT77Q7Z794 578 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 LINC00346Q8IVM7 164 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PRSS35Q8N3Z0 413 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 MEIOBQ8N635 442 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 OR10H5Q8NGA6 315 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 OR6N1Q8NGY5 312 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ABHD3Q8WU67 409 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 C4orf45Q96LM5 186 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PLGRKTQ9HBL7 147 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SMURF1Q9HCE7 757 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 HMG20AQ9NP66 347 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PAQR5Q9NXK6 330 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF281Q9Y2X9 895 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 LRP12Q9Y561 859 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PEX16Q9Y5Y5 336 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 FREM1Q5H8C1 2179 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CACNA1GO43497 2377 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 A0A1B0GTH9 108 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CASKO14936 926 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF254O75437 659 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 PNPP00491 289 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 KIR3DL2P43630 455 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CCR9P51686 369 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 PMP22Q01453 160 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 RASGEF1BQ0VAM2 473 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 WDR38Q5JTN6 314 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 OR7E24Q6IFN5 339 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CORO6Q6QEF8 472 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 PAMR1Q6UXH9 720 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 NR2C2APQ86WQ0 139 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 OR10S1Q8NGN2 331 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 PHYHIPQ92561 330 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 BORCS5Q969J3 196 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 NABP1Q96AH0 204 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TMEM45BQ96B21 275 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 OR14A2Q96R54 314 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 WDR12Q9GZL7 423 aaKnown RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 ARHGAP21Q5T5U3 1957 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TRAV1-2A0A0B4J238 106 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TRBV5-5A0A0J9YX44 114 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TMEM212A6NML5 194 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 DLL1O00548 723 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 DHHO43323 396 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TMCC2O75069 709 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 IGHG3P01860 377 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CPN1P15169 458 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF24P17028 368 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 RIDAP52758 137 aaKnown RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 SRYQ05066 204 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 MFGE8Q08431 387 aaPredicted RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF846Q147U1 533 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 RHOUQ7L0Q8 258 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TPRA1Q86W33 373 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 IL17RDQ8NFM7 739 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 OR5AK2Q8NH90 309 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 KCNS3Q9BQ31 491 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 DEFB127Q9H1M4 99 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 SEC61A2Q9H9S3 476 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 CRNNQ9UBG3 495 aaPredicted RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 MSRB2Q9Y3D2 182 aa8.35□□□□□ -1.07
SF3B1-211ENST00000487698 PCDHGA9Q9Y5G4 932 aaKnown RBP8.35□□□□□ -1.07
SF3B1-211ENST00000487698 TRGV5A0A0B4J1U4 118 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 SMIM30A4D0T7 59 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF879B4DU55 563 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 J3QRK9 145 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 CTDSP2O14595 271 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 PIN1P1O15428 100 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 SLC43A1O75387 559 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 ARL6IP5O75915 188 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 ETV6P41212 452 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 CAV3P56539 151 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
SF3B1-211ENST00000487698 CFAP77Q6ZQR2 320 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 AAED1Q7RTV5 226 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 CCDC190Q86UF4 302 aa8.34□□□□□ -1.07
SF3B1-211ENST00000487698 CATSPERDQ86XM0 798 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms