RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 SOWAHCQ53LP3 525 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 THEM4Q5T1C6 240 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 TSPO2Q5TGU0 170 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NXNL2Q5VZ03 156 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 MTFR2Q6P444 385 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 VWA1Q6PCB0 445 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NCCRP1Q6ZVX7 275 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 BCDIN3DQ7Z5W3 292 aaKnown RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF786Q8N393 782 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NAXEQ8NCW5 288 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 RHOXF1Q8NHV9 184 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 APH1BQ8WW43 257 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NSMAFQ92636 917 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NMD3Q96D46 503 aaKnown RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF582Q96NG8 517 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 CNN2Q99439 309 aaKnown RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 HCAR1Q9BXC0 346 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 MRPL13Q9BYD1 178 aaKnown RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 LINC00470Q9BZP3 86 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NMNAT2Q9BZQ4 307 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NUAK2Q9H093 628 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 RACGAP1Q9H0H5 632 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 OR51V1Q9H2C8 321 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 SLC7A10Q9NS82 523 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 H2AFY2Q9P0M6 372 aaPredicted RBP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 UPB1Q9UBR1 384 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 MALT1Q9UDY8 824 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 BLOC1S6Q9UL45 172 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.74□□□□□ -1.33
GARNL3-218ENST00000487565 POLR1DQ9Y2S0 133 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 FKBP7Q9Y680 259 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 FREM3P0C091 2139 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 SHANK1Q9Y566 2161 aa6.74□□□□□ -1.33
GARNL3-218ENST00000487565 NBASA2RRP1 2371 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 A0A0G2JNJ9 132 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 A0A1B0GUH1 482 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 CCDC182A6NF36 153 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 FAM171A2A8MVW0 826 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 DHHO43323 396 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 DENRO43583 198 aaKnown RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 WBP4O75554 376 aaKnown RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 UPK3AO75631 287 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 IL18BPO95998 194 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 HLA-DQA2P01906 255 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 QDPRP09417 244 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 CLUP10909 449 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 GABRB1P18505 474 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 BMP5P22003 454 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 SLC2A5P22732 501 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 EDNRAP25101 427 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 HTR1FP30939 366 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 FMO3P31513 532 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 GUCA1AP43080 201 aaPredicted RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 BLVRAP53004 296 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 ISL1P61371 349 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 PLP2Q04941 152 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 STK11Q15831 433 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 IGFBP7Q16270 282 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 HIST3H3Q16695 136 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 CEACAM16Q2WEN9 425 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 SLC35D3Q5M8T2 416 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 SLC25A30Q5SVS4 291 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF362Q5T0B9 420 aaPredicted RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 C10orf128Q5T292 105 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 AADACL4Q5VUY2 407 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 FBXW9Q5XUX1 488 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 MEPCEQ7L2J0 689 aaKnown RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 FJX1Q86VR8 437 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 GLB1L2Q8IW92 636 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 OR10H5Q8NGA6 315 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 OR51L1Q8NGJ5 315 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 MCHR2Q969V1 340 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 TSSK2Q96PF2 358 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 OPN3Q9H1Y3 402 aaPredicted RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 PIGMQ9H3S5 423 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 CRLF2Q9HC73 371 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 GPR35Q9HC97 309 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 AASSQ9UDR5 926 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 Q9UFV3 132 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 WARS2Q9UGM6 360 aaKnown RBP6.73□□□□□ -1.33
GARNL3-218ENST00000487565 PRSS50Q9UI38 385 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 MOKQ9UQ07 419 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 LRRC42Q9Y546 428 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 MYO18BQ8IUG5 2567 aa6.73□□□□□ -1.33
GARNL3-218ENST00000487565 IGKV1D-43A0A0B4J1Z2 117 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 TRAV20A0A0B4J274 112 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 IRGMA1A4Y4 181 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 EFCAB10A6NFE3 127 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 FAM90A27PA6NNH2 459 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SLC1A7O00341 560 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 DCTN6O00399 190 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 LRRTM2O43300 516 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SEC14L2O76054 403 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 GLCEO94923 617 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 CNOT4O95628 575 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 MRPL3P09001 348 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms