RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RAB1CQ92928 201 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 ELMOD3Q96FG2 381 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 FNDC11Q9BVV2 318 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 MAN2C1Q9NTJ4 1040 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 MRGBPQ9NV56 204 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
VPS16-208ENST00000487461 PLSCR5A0PG75 271 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 EFCAB9A8MZ26 197 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 NR2C1P13056 603 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 EPHA1P21709 976 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 IFNA8P32881 189 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 RBMXP38159 391 aaKnown RBP10.34□□□□□ -0.75
VPS16-208ENST00000487461 GUCA1AP43080 201 aaPredicted RBP10.34□□□□□ -0.75
VPS16-208ENST00000487461 PCBD1P61457 104 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 TBPL2Q6SJ96 375 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 UNQ6126/PRO20091Q6UXV3 157 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 ZNF771Q7L3S4 317 aaPredicted RBP10.34□□□□□ -0.75
VPS16-208ENST00000487461 OAFQ86UD1 273 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 SLC15A3Q8IY34 581 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 C1orf174Q8IYL3 243 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 ABHD4Q8TB40 342 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 FNDC8Q8TC99 324 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 ZNF418Q8TF45 676 aaPredicted RBP10.34□□□□□ -0.75
VPS16-208ENST00000487461 LZICQ8WZA0 190 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 RAB39BQ96DA2 213 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 TIMD4Q96H15 378 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 C4orf45Q96LM5 186 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 PCDHB10Q9UN67 800 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 ARHGAP32A7KAX9 2087 aa10.34□□□□□ -0.75
VPS16-208ENST00000487461 A0A087WUU8 490 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 A0A0G2JMP0 313 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 A0A0X1KG70 313 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 A0A1W2PPL8 197 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 A6NIZ1 184 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 H7C1C5 153 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 ICMTO60725 284 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 ADH4P08319 380 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 ZNF26P17031 533 aaPredicted RBP10.33□□□□□ -0.76
VPS16-208ENST00000487461 ADRA2CP18825 462 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 MSR1P21757 451 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 CFPP27918 469 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 LIPAP38571 399 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 RAP1BP61224 184 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 LCN6P62502 163 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 RAP1AP62834 184 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 LIPEQ05469 1076 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 PSG7Q13046 419 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 SCGB2A2Q13296 93 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 TRAM2Q15035 370 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 FAM205BPQ63HN1 556 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 USP43Q70EL4 1123 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 C1QL2Q7Z5L3 287 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 PEG10Q86TG7 708 aaKnown RBP10.33□□□□□ -0.76
VPS16-208ENST00000487461 RNF113BQ8IZP6 322 aaKnown RBP10.33□□□□□ -0.76
VPS16-208ENST00000487461 OFCC1Q8IZS5 231 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 POU5F2Q8N7G0 328 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 OR4M2Q8NGB6 313 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 OR13C2Q8NGS9 318 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 RCN3Q96D15 328 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 EGLN1Q9GZT9 426 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 POFUT1Q9H488 388 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 ELOVL3Q9HB03 270 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 MSL2Q9HCI7 577 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 EMC7Q9NPA0 242 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 POLE4Q9NR33 117 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 CYSLTR2Q9NS75 346 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 ARMCX1Q9P291 453 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 OPN4Q9UHM6 478 aa10.33□□□□□ -0.76
VPS16-208ENST00000487461 C12orf71A8MTZ7 269 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 H3BSA7 217 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 J3QLI3 93 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 CDC42EP2O14613 210 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 PRSS23O95084 383 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 IFNW1P05000 195 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 CD55P08174 381 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 SLC9A3P48764 834 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 ARHGDIAP52565 204 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 HILS1P60008 231 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 SLC3A1Q07837 685 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 CDK5R2Q13319 367 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 ANKDD1AQ495B1 522 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 MTX3Q5HYI7 312 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 DCAF12L2Q5VW00 463 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 ZNF730Q6ZMV8 503 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 MBOAT2Q6ZWT7 520 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 TSEN54Q7Z6J9 526 aaKnown RBP10.32□□□□□ -0.76
VPS16-208ENST00000487461 TEX29Q8N6K0 151 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 GEMIN6Q8WXD5 167 aaKnown RBP10.32□□□□□ -0.76
VPS16-208ENST00000487461 ACOT11Q8WXI4 607 aaPredicted RBP10.32□□□□□ -0.76
VPS16-208ENST00000487461 Q96M85 177 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 GAL3ST1Q99999 423 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 C7orf69Q9H7B7 122 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 UBAP1Q9NZ09 502 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 GRHPRQ9UBQ7 328 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 ZDHHC8Q9ULC8 765 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 AP3M1Q9Y2T2 418 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 ADAM18Q9Y3Q7 739 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms