RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 AAED1Q7RTV5 226 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 CEACAM19Q7Z692 300 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 TPRA1Q86W33 373 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 CROCCP3Q8IVE0 287 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ZADH2Q8N4Q0 377 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 TEX19Q8NA77 164 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 OR6Q1Q8NGQ2 317 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 OR52N5Q8NH56 324 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 C11orf40Q8WZ69 217 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 AP3S1Q92572 193 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 GHSRQ92847 366 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 BORCS5Q969J3 196 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM54Q969K7 222 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SLC25A46Q96AG3 418 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 TRMT61AQ96FX7 289 aaKnown RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 FOXN4Q96NZ1 517 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 OR2M2Q96R28 347 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SMAD5Q99717 465 aaKnown RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ABHD6Q9BV23 337 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 PRRG4Q9BZD6 226 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ULBP2Q9BZM5 246 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 C6orf62Q9GZU0 229 aaPredicted RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SLC6A15Q9H2J7 730 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SEC61A2Q9H9S3 476 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ELOVL3Q9HB03 270 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SNTG1Q9NSN8 517 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 SLCO1C1Q9NYB5 712 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 EMC3Q9P0I2 261 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 MRM2Q9UI43 246 aaKnown RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 KLHDC2Q9Y2U9 406 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 FLVCR1Q9Y5Y0 555 aa6.26□□□□□ -1.41
SF3A3-206ENST00000487062 ZFHX2Q9C0A1 2572 aaPredicted RBP6.26□□□□□ -1.41
SF3A3-206ENST00000487062 MYO15AQ9UKN7 3530 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 DMDP11532 3685 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 IGKV1D-43A0A0B4J1Z2 117 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM212A6NML5 194 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 H0YC42 278 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PSMD9O00233 223 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TFECO14948 347 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 LRRTM2O43300 516 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 DHHO43323 396 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 SC5DO75845 299 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 MPZL1O95297 269 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ABHD16AO95870 558 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 H2BFMP0C1H6 154 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 KLK2P20151 261 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 SDC2P34741 201 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 OPRL1P41146 370 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 RPS27P42677 84 aaKnown RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 CCR9P51686 369 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 BMXP51813 675 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF133P52736 654 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 CLDN18P56856 261 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 LSM6P62312 80 aaKnown RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 SRYQ05066 204 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ACSM3Q53FZ2 586 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZMAT1Q5H9K5 638 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 FDX2Q6P4F2 183 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 MZT2AQ6P582 158 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 KLHL24Q6TFL4 600 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 LRRN1Q6UXK5 716 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 DCXRQ7Z4W1 244 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 WDFY1Q8IWB7 410 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 MCEMP1Q8IX19 187 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 C20orf196Q8IYI0 205 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM123Q8N131 208 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 GPR137CQ8N3F9 429 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF676Q8N7Q3 588 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZIC4Q8N9L1 334 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 OR2G2Q8NGZ5 317 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 OR5AK2Q8NH90 309 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 RPS4Y2Q8TD47 263 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 RNF128Q8TEB7 428 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ROBO4Q8WZ75 1007 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM45BQ96B21 275 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PGLYRP3Q96LB9 341 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 CEP19Q96LK0 163 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF385AQ96PM9 386 aaKnown RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PDCD1LG2Q9BQ51 273 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 SCNM1Q9BWG6 230 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 DEFB127Q9H1M4 99 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 NELFAQ9H3P2 528 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TPK1Q9H3S4 243 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 C1orf198Q9H425 327 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 NIPAL2Q9H841 368 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 ZDHHC11Q9H8X9 412 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 RNF122Q9H9V4 155 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PALMDQ9NP74 551 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 POLE4Q9NR33 117 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PARPBPQ9NWS1 579 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PCDHGA9Q9Y5G4 932 aaKnown RBP6.25□□□□□ -1.41
SF3A3-206ENST00000487062 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 FAM186AA6NE01 2351 aa6.25□□□□□ -1.41
SF3A3-206ENST00000487062 TNRC6AQ8NDV7 1962 aaKnown RBP6.24□□□□□ -1.41
SF3A3-206ENST00000487062 IGKV3D-15A0A087WSY6 115 aa6.24□□□□□ -1.41
SF3A3-206ENST00000487062 TRAV1-2A0A0B4J238 106 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms