RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ADH4P08319 380 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 LCN2P80188 198 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 ENDOGQ14249 297 aaKnown RBP16.29■□□□□ 0.2
COL27A1-205ENST00000485397 COQ5Q5HYK3 327 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 UNQ6126/PRO20091Q6UXV3 157 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 FOXL2NBQ6ZUU3 175 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 OR51A7Q8NH64 312 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 NANPQ8TBE9 248 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 C4orf45Q96LM5 186 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 PRRC1Q96M27 445 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 EGLN1Q9GZT9 426 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 C7orf69Q9H7B7 122 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 CYSLTR2Q9NS75 346 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 RHCGQ9UBD6 479 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 OPN4Q9UHM6 478 aa16.29■□□□□ 0.2
COL27A1-205ENST00000485397 TRAV27A0A087WT01 109 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 LOC100653049A0A140TA62 436 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 FAM220BPB1ANY3 271 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 KRT34O76011 436 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 NPPAP01160 153 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 PCBD1P61457 104 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 FHL1Q13642 323 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 HDXQ7Z353 690 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 NRMQ8IXM6 262 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 C3orf56Q8N813 242 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 C22orf15Q8WYQ4 148 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 JMJD8Q96S16 334 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 RBM4Q9BWF3 364 aaKnown RBP16.28■□□□□ 0.2
COL27A1-205ENST00000485397 SUCNR1Q9BXA5 334 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 ESM1Q9NQ30 184 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
COL27A1-205ENST00000485397 SNX13Q9Y5W8 968 aa16.28■□□□□ 0.2
COL27A1-205ENST00000485397 BBIP1A8MTZ0 92 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 H7C1C5 153 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 J3KTA2 159 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 ICMTO60725 284 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 CD55P08174 381 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 ZFP36P26651 326 aaKnown RBP16.27■□□□□ 0.2
COL27A1-205ENST00000485397 LIPAP38571 399 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 GUCA1AP43080 201 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-205ENST00000485397 LCN6P62502 163 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 SELENOWP63302 87 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 SLC3A1Q07837 685 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 PSG7Q13046 419 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 MTX3Q5HYI7 312 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 C1orf174Q8IYL3 243 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 OR2T12Q8NG77 320 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 FNDC8Q8TC99 324 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 DCLRE1CQ96SD1 692 aaKnown RBP16.27■□□□□ 0.2
COL27A1-205ENST00000485397 POFUT1Q9H488 388 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 ELOVL3Q9HB03 270 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 EMC7Q9NPA0 242 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 SAR1AQ9NR31 198 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 MAN2C1Q9NTJ4 1040 aa16.27■□□□□ 0.2
COL27A1-205ENST00000485397 HTR3EA5X5Y0 456 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 H3BSA7 217 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 TIMM8AO60220 97 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-205ENST00000485397 FSHBP01225 129 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 SBK2P0C263 348 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 MSR1P21757 451 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 IFNA8P32881 189 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 ARHGDIAP52565 204 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 TNFAIP6P98066 277 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-205ENST00000485397 FAM205BPQ63HN1 556 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 VTCN1Q7Z7D3 282 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 BPIFB2Q8N4F0 458 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 ZDHHC22Q8N966 263 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 OR13C2Q8NGS9 318 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 ST7LQ8TDW4 575 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 DIRC2Q96SL1 478 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 POLE4Q9NR33 117 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 GID8Q9NWU2 228 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 CGGBP1Q9UFW8 167 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-205ENST00000485397 ZDHHC8Q9ULC8 765 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 NPTNQ9Y639 398 aa16.26■□□□□ 0.19
COL27A1-205ENST00000485397 ELOVL7A1L3X0 281 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 A6NIZ1 184 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 C12orf71A8MTZ7 269 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 EFCAB9A8MZ26 197 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 FFAR1O14842 300 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 SPRY1O43609 319 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-205ENST00000485397 PRSS23O95084 383 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 ABHD16AO95870 558 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 EGR1P18146 543 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 GATA3P23771 443 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 LIMS1P48059 325 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 RAP1BP61224 184 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 RAP1AP62834 184 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 PRKCDQ05655 676 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 CDK5R2Q13319 367 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 TRAM2Q15035 370 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 MAPRE2Q15555 327 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 CGB2Q6NT52 195 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 OAFQ86UD1 273 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 OFCC1Q8IZS5 231 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 PCYOX1LQ8NBM8 494 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 FNDC11Q9BVV2 318 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 VIPAS39Q9H9C1 493 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 MMP26Q9NRE1 261 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 CMTM6Q9NX76 183 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms