RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 IL2RAP01589 272 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 DPP4P27487 766 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 SRD5A2P31213 254 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 PRKAR1BP31321 381 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 CEACAM8P31997 349 aaPredicted RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 TIMP3P35625 211 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 STARP49675 285 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 ZNF81P51508 661 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 MANFP55145 182 aaKnown RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 DLX5P56178 289 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 BTN2A1Q7KYR7 527 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 OVCH2Q7RTZ1 564 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 SZRD1Q7Z422 152 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 ZER1Q7Z7L7 766 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 IQCF1Q8N6M8 205 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 GNPDA2Q8TDQ7 276 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 RNF138Q8WVD3 245 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 PRRC1Q96M27 445 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 SFXN2Q96NB2 322 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 RBP7Q96R05 134 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 ZNF559Q9BR84 538 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 LMF2Q9BU23 707 aaKnown RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 DPCDQ9BVM2 203 aaPredicted RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 DLL4Q9NR61 685 aa9.6□□□□□ -0.87
DDX56-212ENST00000485367 MRTO4Q9UKD2 239 aaKnown RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 RPH3AQ9Y2J0 694 aaPredicted RBP9.6□□□□□ -0.87
DDX56-212ENST00000485367 GXYLT2A0PJZ3 443 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 SMIM30A4D0T7 59 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 CD8B2A6NJW9 211 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 M0R233 179 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 GPR171O14626 319 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 FADS1O60427 444 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 IL33O95760 270 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 CPN1P15169 458 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 CAPZA2P47755 286 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 DHODHQ02127 395 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 DYRK1AQ13627 763 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 SNTB1Q13884 538 aaKnown RBP9.59□□□□□ -0.87
DDX56-212ENST00000485367 ZNF273Q14593 569 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 GSG1Q2KHT4 349 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 RASSF6Q6ZTQ3 369 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.59□□□□□ -0.87
DDX56-212ENST00000485367 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
DDX56-212ENST00000485367 NUP43Q8NFH3 380 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 OR2T4Q8NH00 348 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 OR56B4Q8NH76 319 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 ZPLD1Q8TCW7 415 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 TMED9Q9BVK6 235 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 ANKRD19PQ9H560 264 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 CXorf36Q9H7Y0 433 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 CALHM2Q9HA72 323 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 SDHAF3Q9NRP4 125 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 RDH8Q9NYR8 311 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 MED11Q9P086 117 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 MBD2Q9UBB5 411 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 PCNX3Q9H6A9 2034 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
DDX56-212ENST00000485367 SPG11Q96JI7 2443 aa9.59□□□□□ -0.88
DDX56-212ENST00000485367 CIB4A0PJX0 185 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 GTPBP1O00178 669 aaKnown RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZIC3O60481 467 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 SOX30O94993 753 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 UTS2O95399 124 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MPC2O95563 127 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ECDO95905 644 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 IFI6P09912 130 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 CELP19835 753 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 LCN1P31025 176 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MMP15P51511 669 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZNF136P52737 540 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 PSMD4P55036 377 aaKnown RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 CDH11P55287 796 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 GFRA1P56159 465 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 DBPQ10586 325 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 TSPAN31Q12999 210 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 IDNKQ5T6J7 187 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 CDC73Q6P1J9 531 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TFAP2EQ6VUC0 442 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TMEM91Q6ZNR0 172 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MARCH3Q86UD3 253 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TOMM5Q8N4H5 51 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 C9orf106Q8NAJ2 232 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 OR2M3Q8NG83 312 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 DUSP19Q8WTR2 217 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 SLC9A6Q92581 669 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 FBXW5Q969U6 566 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 LRRC46Q96FV0 321 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 TBL1XR1Q9BZK7 514 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 SAP130Q9H0E3 1048 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 SHARPINQ9H0F6 387 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ACSS1Q9NUB1 689 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 P2RX2Q9UBL9 471 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 ZNF629Q9UEG4 869 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 MRPS18CQ9Y3D5 142 aaKnown RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 SHISA3A0PJX4 238 aa9.58□□□□□ -0.88
DDX56-212ENST00000485367 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 MBD3L3A6NE82 208 aaPredicted RBP9.58□□□□□ -0.88
DDX56-212ENST00000485367 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms