RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ERCC8Q13216 396 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 CUL2Q13617 745 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 SLC16A14Q7RTX9 510 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 BIVMQ86UB2 503 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 BBS5Q8N3I7 341 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 OTUD6BQ8N6M0 293 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 OR4A4PQ8NGN8 299 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 UBALD1Q8TB05 177 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 SLC25A2Q9BXI2 301 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 C12orf10Q9HB07 376 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 NEK6Q9HC98 313 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 NECAP2Q9NVZ3 263 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 UXTQ9UBK9 157 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF222Q9UK12 451 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 IGSF9BQ9UPX0 1349 aa3.35□□□□□ -1.87
SF3B1-210ENST00000482158 PCM1Q15154 2024 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 COL4A4P53420 1690 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 IGHV5-10-1A0A0J9YXX1 117 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 LRCOL1A6NCL2 159 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 SIRPB1O00241 398 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 NUPL2O15504 423 aaKnown RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 MED6O75586 246 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 AGTP01019 485 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 KRT14P02533 472 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 DCKP27707 260 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 DEKP35659 375 aaKnown RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 SLC1A1P43005 524 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 GINS1Q14691 196 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 RGNQ15493 299 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 OR7A5Q15622 319 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 UBE2SQ16763 222 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 ARL9Q6T311 187 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 PLET1Q6UQ28 207 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 CMTM1Q8IZ96 169 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 OR4C5Q8NGB2 326 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 C20orf24Q9BUV8 137 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 FAM192AQ9GZU8 254 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 SAV1Q9H4B6 383 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 UBE2ZQ9H832 354 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF430Q9H8G1 570 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-210ENST00000482158 ZNF160Q9HCG1 818 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 HRASLS2Q9NWW9 162 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 KCNE3Q9Y6H6 103 aa3.34□□□□□ -1.87
SF3B1-210ENST00000482158 NINLQ9Y2I6 1382 aa3.34□□□□□ -1.88
SF3B1-210ENST00000482158 NUP214P35658 2090 aaPredicted RBP3.34□□□□□ -1.88
SF3B1-210ENST00000482158 TRBV9A0A0B4J1U6 114 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 EIF4E2O60573 245 aaKnown RBP3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CTDNEP1O95476 244 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 H6PDO95479 791 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 IGHV1-8P0DP01 117 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CCNB1P14635 433 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 RRM2P31350 389 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CSNK1EP49674 416 aaKnown RBP3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CRISP1P54107 249 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 ESRRGP62508 458 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 RAP1AP62834 184 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CCNA1P78396 465 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 SYCNQ0VAF6 134 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 TCP10Q12799 353 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 Q5W150 140 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 TMEM220Q6QAJ8 160 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 IGFL3Q6UXB1 125 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 OR2A1Q8NGT9 310 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 ABHD3Q8WU67 409 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 NRGNQ92686 78 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 SEH1LQ96EE3 360 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 COL21A1Q96P44 957 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 CHP1Q99653 195 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 TMEM9BQ9NQ34 198 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 UVRAGQ9P2Y5 699 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 TMED5Q9Y3A6 229 aa3.33□□□□□ -1.88
SF3B1-210ENST00000482158 YTHDF2Q9Y5A9 579 aaKnown RBP3.33□□□□□ -1.88
SF3B1-210ENST00000482158 DOCK9Q9BZ29 2069 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 CABIN1Q9Y6J0 2220 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 NDUFAB1O14561 156 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 LSM1O15116 133 aaKnown RBP3.32□□□□□ -1.88
SF3B1-210ENST00000482158 HLA-DPB1P04440 258 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 SERPINE2P07093 398 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 RAB3BP20337 219 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 NAMPTP43490 491 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 RPS15P62841 145 aaKnown RBP3.32□□□□□ -1.88
SF3B1-210ENST00000482158 LIPEQ05469 1076 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 STK11Q15831 433 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 TMEM205Q6UW68 189 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 SCD5Q86SK9 330 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 CAPSLQ8WWF8 208 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 MRGPRFQ96AM1 343 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 PARP12Q9H0J9 701 aaKnown RBP3.32□□□□□ -1.88
SF3B1-210ENST00000482158 TMEM165Q9HC07 324 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 CYTL1Q9NRR1 136 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 SAMSN1Q9NSI8 373 aaKnown RBP3.32□□□□□ -1.88
SF3B1-210ENST00000482158 OPN4Q9UHM6 478 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 SLC17A4Q9Y2C5 497 aa3.32□□□□□ -1.88
SF3B1-210ENST00000482158 SLIT3O75094 1523 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms