RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TUBAL3A6NHL2 446 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SH2D7A6NKC9 451 aaPredicted RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 LIPCP11150 499 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 TCN2P20062 427 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 IVDP26440 423 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ADPRMQ3LIE5 342 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 FCRL6Q6DN72 434 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 FBXO27Q8NI29 283 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 CALHM2Q9HA72 323 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 STRAPQ9Y3F4 350 aaKnown RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 OR2C1O95371 312 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SPCS2Q15005 226 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ZNF620Q6ZNG0 422 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OBP2AQ9NY56 170 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 CCR9P51686 369 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 LBX1P52954 281 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 LPAL2Q16609 132 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ANKRD53Q8N9V6 530 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 L3MBTL4Q8NA19 623 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OR2AK2Q8NG84 335 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SSX9Q7RTT3 188 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 PDLIM7Q9NR12 457 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 USP22Q9UPT9 525 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 PMP2P02689 132 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 IHHQ14623 411 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ZNF836Q6ZNA1 936 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OR13C9Q8NGT0 318 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SLCO2B1O94956 709 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 CALCBP10092 127 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 SPP1P10451 314 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 BCL7AQ4VC05 210 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 C18orf63Q68DL7 685 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 OR13F1Q8NGS4 319 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 NMES1Q9C002 83 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 WWTR1Q9GZV5 400 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 FAM234AQ9H0X4 552 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 ST8SIA3O43173 380 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 NCR1O76036 304 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 ZDHHC11BP0C7U3 371 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 ERHP84090 104 aaKnown RBP8.77□□□□□ -1
VEGFA-212ENST00000480614 SMIM21Q3B7S5 101 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 TCTE3Q8IZS6 198 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 GOT1L1Q8NHS2 421 aaPredicted RBP8.77□□□□□ -1
VEGFA-212ENST00000480614 MS4A8Q9BY19 250 aa8.77□□□□□ -1
VEGFA-212ENST00000480614 ADAM12O43184 909 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 ATXN1LP0C7T5 689 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SPI1P17947 270 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SOX18P35713 384 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 HSF1Q00613 529 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 TMEM174Q8WUU8 243 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 GALNT9Q9HCQ5 603 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 HCCSP53701 268 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 C17orf99Q6UX52 265 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 MED25Q71SY5 747 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 MAML2Q8IZL2 1156 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 COQ3Q9NZJ6 369 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PPP5D1E7EU14 171 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 GALR2O43603 387 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 LALBAP00709 142 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 EN2P19622 333 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PXDC1Q5TGL8 231 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 GLIPR1L1Q6UWM5 242 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 BTNL8Q6UX41 500 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 APH1BQ8WW43 257 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 CSNK1G1Q9HCP0 422 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 RBBP6Q7Z6E9 1792 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SMIM17P0DL12 118 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PVRP15151 417 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 HTR4Q13639 388 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 LHFPL2Q6ZUX7 228 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PTRH1Q86Y79 214 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 TSLPQ969D9 159 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 QRSL1Q9H0R6 528 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 HCFC1R1Q9NWW0 138 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 CTNSO60931 367 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 ALX3O95076 343 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 GASTP01350 101 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 HLA-FP30511 346 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 EDDM3BP56851 147 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 H3F3AP84243 136 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 ENDOGQ14249 297 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 CSF3RQ99062 836 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 MED20Q9H944 212 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 ALS2Q96Q42 1657 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 ANK1P16157 1881 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 RAB5AP20339 215 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 MAKP20794 623 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 GJA4P35212 333 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 DDOSTP39656 456 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 THEM4Q5T1C6 240 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 LDLRAD1Q5T700 205 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 USP51Q70EK9 711 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 OPALINQ96PE5 141 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PHLDA2Q53GA4 152 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SLCO4C1Q6ZQN7 724 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 PIWIL3Q7Z3Z3 882 aaKnown RBP8.77□□□□□ -1.01
VEGFA-212ENST00000480614 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
VEGFA-212ENST00000480614 UTP4Q969X6 686 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms