RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OR6F1Q8NGZ6 308 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 MAP6Q96JE9 813 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 NIT2Q9NQR4 276 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 ANKRD61A6NGH8 418 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
COL20A1-206ENST00000479501 CCDC71LQ8N9Z2 235 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 OR6M1Q8NGM8 313 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 MCTS1Q9ULC4 181 aaKnown RBP13.04□□□□□ -0.32
COL20A1-206ENST00000479501 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 SPNP16150 400 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 H3F3CQ6NXT2 135 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 KMT5CQ86Y97 462 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 SULF2Q8IWU5 870 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 LRRC18Q8N456 261 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 OR8D4Q8NGM9 314 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 FGGYQ96C11 551 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL20A1-206ENST00000479501 UNC13CQ8NB66 2214 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 OR6C76A6NM76 312 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TAS2R20P59543 309 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MFSD4AQ8N468 514 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 IGHV5-51A0A0C4DH38 117 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 LOC102725191A0A1B0GVB3 256 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 EIF1BO60739 113 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 PIAS2O75928 621 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 CT62P0C5K7 136 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MYF5P13349 255 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 SSX2Q16385 188 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TMUB2Q71RG4 321 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ZBTB44Q8NCP5 570 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 C8orf44Q96CB5 159 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 NICN1Q9BSH3 213 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ENY2Q9NPA8 101 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 WIF1Q9Y5W5 379 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 CACNA1IQ9P0X4 2223 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 HRO43593 1189 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 GABRB1P18505 474 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 SEC61A1P61619 476 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 GABREP78334 506 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TOR2AQ5JU69 321 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MEX3BQ6ZN04 569 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ABI3BPQ7Z7G0 1075 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ARPC5LQ9BPX5 153 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 BOKQ9UMX3 212 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TIMM8BQ9Y5J9 83 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 CDC42EP2O14613 210 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 CD79AP11912 226 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MVDP53602 400 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 EPHA4P54764 986 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 UBE2NP61088 152 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 HSF1Q00613 529 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TNK1Q13470 666 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 HEPHL1Q6MZM0 1159 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 MRPL21Q7Z2W9 205 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 RDH10Q8IZV5 341 aa13.03□□□□□ -0.32
COL20A1-206ENST00000479501 ZMAT3Q9HA38 289 aaKnown RBP13.03□□□□□ -0.32
COL20A1-206ENST00000479501 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 LOC100289279A0A1B0GTE1 492 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 H3BUI4 141 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 GABARAPH6UMI1 98 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 K7EPK0 472 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 IGHEP01854 428 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 DGCR2P98153 550 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 AAED1Q7RTV5 226 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 FAM71E2Q8N5Q1 922 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 ST8SIA1Q92185 356 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 ENKD1Q9H0I2 346 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 CHST11Q9NPF2 352 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 ANK1P16157 1881 aa13.02□□□□□ -0.32
COL20A1-206ENST00000479501 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 A6NLC8 198 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 NUDT21O43809 227 aaKnown RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 SERPINA2P20848 420 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 NME2P22392 152 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 SLC22A24Q8N4F4 322 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 ZSCAN4Q8NAM6 433 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 NUDT9Q9BW91 350 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 TMEM59Q9BXS4 323 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 PCED1AQ9H1Q7 454 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 PIGMQ9H3S5 423 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 SMCO4Q9NRQ5 59 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 FAM212BQ9NTI7 297 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 KLF15Q9UIH9 416 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 CASP8AP2Q9UKL3 1982 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms