RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 LCN6P62502 163 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PSG4Q00888 419 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 HSF2Q03933 536 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 SCRN3Q0VDG4 424 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 AQP6Q13520 282 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 CCNIQ14094 377 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 DAG1Q14118 895 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 ADIPOQQ15848 244 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 MST1LQ2TV78 715 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PABPC1L2AQ5JQF8 200 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 LEG1Q6P5S2 330 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 HIPK1Q86Z02 1210 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 KRTAP1-3Q8IUG1 177 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 OR6V1Q8N148 313 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-217ENST00000479161 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 NIPSNAP1Q9BPW8 284 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 TSSK6Q9BXA6 273 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PLA2G12AQ9BZM1 189 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 TUBG2Q9NRH3 451 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 TBC1D23Q9NUY8 699 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 KCNG2Q9UJ96 466 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 COA3Q9Y2R0 106 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-217ENST00000479161 PMF1-BGLAPU3KQ54 211 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 ACANP16112 2415 aa13.37□□□□□ -0.27
C9orf3-217ENST00000479161 A0A1W2PPL8 197 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR6C68A6NDL8 312 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR4A8P0C604 315 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OSMP13725 252 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 FOSL1P15407 271 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 STOMP27105 288 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 APLNRP35414 380 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 RAD52P43351 418 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 BLVRAP53004 296 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 SLC25A1P53007 311 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 HIST1H3AP68431 136 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 GALK2Q01415 458 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 SLC36A3Q495N2 470 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 HIST2H3PS2Q5TEC6 136 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 ZFP1Q6P2D0 407 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 FAHD1Q6P587 224 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 HIST2H3AQ71DI3 136 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 CPEB3Q8NE35 698 aaKnown RBP13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR2T4Q8NH00 348 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR4K13Q8NH42 304 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 OR5K1Q8NHB7 308 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 TEX47Q8TBZ9 253 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 RBM4Q9BWF3 364 aaKnown RBP13.36□□□□□ -0.27
C9orf3-217ENST00000479161 NMNAT2Q9BZQ4 307 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 CMC2Q9NRP2 79 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 NDRG4Q9ULP0 352 aaKnown RBP13.36□□□□□ -0.27
C9orf3-217ENST00000479161 CMAHPQ9Y471 501 aa13.36□□□□□ -0.27
C9orf3-217ENST00000479161 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
C9orf3-217ENST00000479161 H3BSA7 217 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 DCTN6O00399 190 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 TIPRLO75663 272 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 IFNGP01579 166 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 GAAP10253 952 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 GRK5P34947 590 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 THBS4P35443 961 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 ATP5J2P56134 94 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.35□□□□□ -0.27
C9orf3-217ENST00000479161 CLEC12AQ5QGZ9 265 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 SLC27A4Q6P1M0 643 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 SVOPLQ8N434 492 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 SLC26A10Q8NG04 563 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 DOK1Q99704 481 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 WNT5BQ9H1J7 359 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 CDH20Q9HBT6 801 aa13.35□□□□□ -0.27
C9orf3-217ENST00000479161 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 J3QW42 95 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 HMGN1P05114 100 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 SCG5P05408 212 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 ZNF250P15622 560 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 PPOXP50336 477 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 UCP2P55851 309 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 CDK5Q00535 292 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 ARL9Q6T311 187 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 DNM1P46Q6ZS02 220 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 ZDHHC13Q8IUH4 622 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 GJC3Q8NFK1 279 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 OR4Q3Q8NH05 313 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 HTRA1Q92743 480 aa13.34□□□□□ -0.27
C9orf3-217ENST00000479161 MRPL24Q96A35 216 aaKnown RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 CENPNQ96H22 339 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-217ENST00000479161 TSSK2Q96PF2 358 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms