RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 NDE1Q9NXR1 346 aa16.05■□□□□ 0.16
SREBF1-212ENST00000478616 COA3Q9Y2R0 106 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-212ENST00000478616 IGLV1-36A0A0B4J1U3 117 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 KIAA1324LA8MWY0 1029 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 M0R233 179 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 NDUFS8O00217 210 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 ACOT8O14734 319 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 AHCYL1O43865 530 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 ENTPD5O75356 428 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 CRLF1O75462 422 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 GMNNO75496 209 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 TP53P04637 393 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 GAAP10253 952 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 ITGA2P17301 1181 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 USF1P22415 310 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 CALB2P22676 271 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 MPV17P39210 176 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 MXRA7P84157 204 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 HSF2Q03933 536 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 TRIM25Q14258 630 aaKnown RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 TRIP10Q15642 601 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 TBC1D28Q2M2D7 210 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 ALKBH6Q3KRA9 238 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 GPR139Q6DWJ6 353 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 RGS7BPQ6MZT1 257 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 SMARCD3Q6STE5 483 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 OR8D4Q8NGM9 314 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 MARS2Q96GW9 593 aaKnown RBP16.04■□□□□ 0.16
SREBF1-212ENST00000478616 SAMD8Q96LT4 415 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 PLA2G12AQ9BZM1 189 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 DYNLRB1Q9NP97 96 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 CCNB1IP1Q9NPC3 277 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 DUSP13Q9UII6 198 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 AURKCQ9UQB9 309 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
SREBF1-212ENST00000478616 IQCMA0A1B0GVH7 501 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 C5orf49A4QMS7 147 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 ARPC3O15145 178 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 NR2C1P13056 603 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 APEHP13798 732 aaKnown RBP16.03■□□□□ 0.16
SREBF1-212ENST00000478616 MAGEB1P43366 347 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 RPS23P62266 143 aaKnown RBP16.03■□□□□ 0.16
SREBF1-212ENST00000478616 HNRNPA0Q13151 305 aaKnown RBP16.03■□□□□ 0.16
SREBF1-212ENST00000478616 GGTLC2Q14390 218 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 ZNF362Q5T0B9 420 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-212ENST00000478616 ZNF620Q6ZNG0 422 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 UBASH3BQ8TF42 649 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 ZNRF4Q8WWF5 429 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 C11orf40Q8WZ69 217 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-212ENST00000478616 TAAR3PQ9P1P4 343 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 TIMM10BQ9Y5J6 103 aa16.03■□□□□ 0.16
SREBF1-212ENST00000478616 FBN1P35555 2871 aaKnown RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 LRP5LA4QPB2 252 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 WNT9BO14905 357 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 TLX2O43763 284 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 OR10H3O60404 316 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SLC16A7O60669 478 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 RP2O75695 350 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 TACSTD2P09758 323 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 HIST1H1CP16403 213 aaKnown RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 ZNF16P17020 682 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 APLNRP35414 380 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 MNAT1P51948 309 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 PLP2Q04941 152 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 TSPAN31Q12999 210 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 KCNMB1Q16558 191 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 CARTPTQ16568 116 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 MEP1BQ16820 701 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 CCDC92Q53HC0 331 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SPRNQ5BIV9 151 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SPATA46Q5T0L3 261 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 VASH1Q7L8A9 365 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SYT9Q86SS6 491 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 OR6V1Q8N148 313 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 ARHGAP24Q8N264 748 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 OR1J2Q8NGS2 313 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 OR1J1Q8NGS3 322 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SYNPRQ8TBG9 265 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SLC25A40Q8TBP6 338 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 FANK1Q8TC84 345 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SLC7A6Q92536 515 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 SLC7A6OSQ96CW6 309 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 ERMAPQ96PL5 475 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 PIMREGQ9BSJ6 248 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 EGLN3Q9H6Z9 239 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 YAE1D1Q9NRH1 226 aa16.02■□□□□ 0.16
SREBF1-212ENST00000478616 FBXO9Q9UK97 447 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-212ENST00000478616 ATRQ13535 2644 aa16.02■□□□□ 0.15
SREBF1-212ENST00000478616 OR6C68A6NDL8 312 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 VSTM5A8MXK1 200 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 UBOX5O94941 541 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 PTHP01270 115 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 GASTP01350 101 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 IGHV3-13P01766 116 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 LCKP06239 509 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 PSKH1P11801 424 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 CCNOP22674 350 aa16.01■□□□□ 0.15
SREBF1-212ENST00000478616 RBMXP38159 391 aaKnown RBP16.01■□□□□ 0.15
SREBF1-212ENST00000478616 SMIM11AP58511 58 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms