RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZNF101Q8IZC7 436 aa20.04■□□□□ 0.8
C9orf3-215ENST00000478473 ACTR3BQ9P1U1 418 aa20.04■□□□□ 0.8
C9orf3-215ENST00000478473 CDC42EP3Q9UKI2 254 aa20.04■□□□□ 0.8
C9orf3-215ENST00000478473 AURKCQ9UQB9 309 aa20.04■□□□□ 0.8
C9orf3-215ENST00000478473 MALRD1Q5VYJ5 2156 aa20.04■□□□□ 0.8
C9orf3-215ENST00000478473 A0A1W2PPW3 197 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 UNC119BA6NIH7 251 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 C17orf100A8MU93 164 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 H7C1C5 153 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 IMPA2O14732 288 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 ARPC3O15145 178 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 HPXP02790 462 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 LCKP06239 509 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 ACHEP22303 614 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 FPR3P25089 353 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 GDI2P50395 445 aaKnown RBP20.03■□□□□ 0.8
C9orf3-215ENST00000478473 LCN6P62502 163 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 CARTPTQ16568 116 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 PCGF3Q3KNV8 242 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 SMARCD3Q6STE5 483 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 OR52J3Q8NH60 311 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 RDH5Q92781 318 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 MCUR1Q96AQ8 359 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 MSI2Q96DH6 328 aaKnown RBP20.03■□□□□ 0.8
C9orf3-215ENST00000478473 MARS2Q96GW9 593 aaKnown RBP20.03■□□□□ 0.8
C9orf3-215ENST00000478473 SNX18Q96RF0 628 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 CHODLQ9H9P2 273 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 TAAR3PQ9P1P4 343 aa20.03■□□□□ 0.8
C9orf3-215ENST00000478473 A0A1W2PPL8 197 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 C5orf49A4QMS7 147 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 DYNC1I1O14576 645 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 FAM107AO95990 144 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 FABP3P05413 133 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 NAT2P11245 290 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 MAGEA2P43356 314 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 CHN2P52757 468 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 TMEM33P57088 247 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 LSM6P62312 80 aaKnown RBP20.02■□□□□ 0.8
C9orf3-215ENST00000478473 KCNMB1Q16558 191 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 RFX4Q33E94 735 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 CHRFAM7AQ494W8 412 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 MTX3Q5HYI7 312 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 MBNL2Q5VZF2 373 aaKnown RBP20.02■□□□□ 0.8
C9orf3-215ENST00000478473 C1orf94Q6P1W5 598 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 UGT2A3Q6UWM9 527 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 OR1J1Q8NGS3 322 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 RASD2Q96D21 266 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 RACGAP1Q9H0H5 632 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 SYT4Q9H2B2 425 aa20.02■□□□□ 0.8
C9orf3-215ENST00000478473 HINT3Q9NQE9 182 aaKnown RBP20.02■□□□□ 0.8
C9orf3-215ENST00000478473 EIF3KQ9UBQ5 218 aaKnown RBP20.02■□□□□ 0.8
C9orf3-215ENST00000478473 NDRG4Q9ULP0 352 aaKnown RBP20.02■□□□□ 0.8
C9orf3-215ENST00000478473 LMX1BO60663 402 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 KHDRBS3O75525 346 aaKnown RBP20.01■□□□□ 0.79
C9orf3-215ENST00000478473 RP2O75695 350 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 NCR1O76036 304 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF16P17020 682 aaPredicted RBP20.01■□□□□ 0.79
C9orf3-215ENST00000478473 TUBG1P23258 451 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 GSSP48637 474 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 RPS6KA3P51812 740 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 SCRN3Q0VDG4 424 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 NKPD1Q17RQ9 610 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 PTCHD4Q6ZW05 846 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 NSL1Q96IY1 281 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 MUC13Q9H3R2 512 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 TUBG2Q9NRH3 451 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 LPAR3Q9UBY5 353 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 IER3IP1Q9Y5U9 82 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 V9GYQ6 96 aa20.01■□□□□ 0.79
C9orf3-215ENST00000478473 B2RBV5 119 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 LYNX1G3V0Z9 82 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 KRT36O76013 467 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 ADH4P08319 380 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 FAM157CP0CG43 387 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 LYNX1P0DP58 116 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 COL8A2P25067 703 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 CDKN2AP42771 156 aaKnown RBP20■□□□□ 0.79
C9orf3-215ENST00000478473 SPIBQ01892 262 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF718Q3SXZ3 478 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 FAM166AQ6J272 317 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF774Q6NX45 483 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 ZDHHC21Q8IVQ6 265 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 GLB1L2Q8IW92 636 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 OR51B6Q9H340 312 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 EMC7Q9NPA0 242 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 TBCCD1Q9NVR7 557 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 ATPIF1Q9UII2 106 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 KLHL21Q9UJP4 597 aa20■□□□□ 0.79
C9orf3-215ENST00000478473 FBN1P35555 2871 aaKnown RBP19.99■□□□□ 0.79
C9orf3-215ENST00000478473 T-ENOLP0DO92 83 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 CCNOP22674 350 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 RRM2P31350 389 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 IFNGR2P38484 337 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 MMP15P51511 669 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 AQP6Q13520 282 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 TMEM255AQ5JRV8 349 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 LCN8Q6JVE9 175 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 RFPL4BQ6ZWI9 263 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 KLF14Q8TD94 323 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-215ENST00000478473 SNX33Q8WV41 574 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms