RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 RAB1BQ9H0U4 201 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 HAUS4Q9H6D7 363 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 NECAP2Q9NVZ3 263 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 CHMP5Q9NZZ3 219 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 CTSZQ9UBR2 303 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PPIAL4AQ9Y536 164 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 STAB2Q8WWQ8 2551 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 DNAH9Q9NYC9 4486 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 A0A087WZ39 114 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 A0A0G2JMP0 313 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 A0A0X1KG70 313 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 A0A1W2PPW3 197 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 OR51F1A6NGY5 319 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 ACOD1A6NK06 481 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 BTNL10A8MVZ5 291 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 G3V4G9 280 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 CCDC188H7C350 402 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 PSMD3O43242 534 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 AIFM1O95831 613 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 GBAP04062 536 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 YES1P07947 543 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 MPC1LP0DKB6 136 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 PGCP20142 388 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 MDKP21741 143 aaPredicted RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 PSMB4P28070 264 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 IL2RGP31785 369 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 HNRNPFP52597 415 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 LIM2P55344 173 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 DSCR4P56555 118 aaPredicted RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 TBPL1P62380 186 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 DYNLT1P63172 113 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 ACVR1Q04771 509 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 TGM3Q08188 693 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 BAMBIQ13145 260 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 EBPQ15125 230 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 FAM106AQ4KMX7 169 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 TOR1AIP1Q5JTV8 583 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 TCHHL1Q5QJ38 904 aaPredicted RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 LEG1Q6P5S2 330 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 C16orf87Q6PH81 154 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 BHLHA15Q7RTS1 189 aaPredicted RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 ZNF571Q7Z3V5 609 aaPredicted RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 PIGWQ7Z7B1 504 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 LINC00523Q86TU6 105 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 UBQLNLQ8IYU4 475 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 ABHD12Q8N2K0 398 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 ZNF786Q8N393 782 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 TTLQ8NG68 377 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 OR4M2Q8NGB6 313 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 RDH11Q8TC12 318 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 NPRL2Q8WTW4 380 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 SNF8Q96H20 258 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 PDLIM5Q96HC4 596 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 INTS14Q96SY0 518 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 AIF1LQ9BQI0 150 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 PELOQ9BRX2 385 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 ANP32EQ9BTT0 268 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 OSBPL11Q9BXB4 747 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 ROGDIQ9GZN7 287 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 DDX47Q9H0S4 455 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 TUBB1Q9H4B7 451 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 LRRC40Q9H9A6 602 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 LYRM4Q9HD34 91 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 KLRF1Q9NZS2 232 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 UVRAGQ9P2Y5 699 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 BAIAP2L1Q9UHR4 511 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 MCTS1Q9ULC4 181 aaKnown RBP3.6□□□□□ -1.83
VPS50-214ENST00000477935 MOKQ9UQ07 419 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 MAD1L1Q9Y6D9 718 aa3.6□□□□□ -1.83
VPS50-214ENST00000477935 CLPSL1A2RUU4 121 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 LRIT2A6NDA9 550 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 ANXA2P2A6NMY6 339 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 CST8O60676 142 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 AQP8O94778 261 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 HIST1H2AGP0C0S8 130 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 FAM58BPP0C7Q3 252 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 GGT1P19440 569 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 EDNRAP25101 427 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 RPL22P35268 128 aaKnown RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 RFX3P48380 749 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 IDH3GP51553 393 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 SUCLG1P53597 346 aaKnown RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 CLDN17P56750 224 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 IGLV3-21P80748 117 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 MYBPC1Q00872 1141 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 CD300CQ08708 224 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 GANABQ14697 944 aaKnown RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 PARP6Q2NL67 630 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 MS4A18Q3C1V0 323 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 GLYR1Q49A26 553 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 ACSBG2Q5FVE4 666 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 OLFML2AQ68BL7 652 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 AGTRAPQ6RW13 159 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 TMEM182Q6ZP80 229 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 Q6ZT83 130 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 KLHDC8AQ8IYD2 350 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 ST13P4Q8IZP2 240 aaPredicted RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 ZNF619Q8N2I2 560 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms