RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 C9orf16Q9BUW7 83 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 BCL2L14Q9BZR8 327 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 SEMA6AQ9H2E6 1030 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 PLK3Q9H4B4 646 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 MYOZ1Q9NP98 299 aaPredicted RBP10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 CCNB1IP1Q9NPC3 277 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 DLL4Q9NR61 685 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 USE1Q9NZ43 259 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 KCNG2Q9UJ96 466 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 CMAHPQ9Y471 501 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 IER3IP1Q9Y5U9 82 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 FKBP7Q9Y680 259 aa10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 FLNAP21333 2647 aaKnown RBP10.69□□□□□ -0.7
CLCNKA-205ENST00000477360 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 IGKV1D-43A0A0B4J1Z2 117 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 J3QW42 95 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 BHLHE40O14503 412 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RENP00797 406 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 TP53P04637 393 aaPredicted RBP10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 CELA3BP08861 270 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 CSF3P09919 207 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 OR4A8P0C604 315 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 CTLA4P16410 223 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 PRKACGP22612 351 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 NOS3P29474 1203 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RAD52P43351 418 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 DAPP51397 102 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 BLVRAP53004 296 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 HSF2Q03933 536 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 GLO1Q04760 184 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 AQP6Q13520 282 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RAB39AQ14964 217 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RAB35Q15286 201 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 SGCAQ16586 387 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 MOGQ16653 247 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 ARL9Q6T311 187 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 MYPOPQ86VE0 399 aaPredicted RBP10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 LNX2Q8N448 690 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 ICA1LQ8NDH6 482 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 FGFBP3Q8TAT2 258 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RASD2Q96D21 266 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 PERPQ96FX8 193 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 SAMD8Q96LT4 415 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 NIPSNAP1Q9BPW8 284 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RBM4BQ9BQ04 359 aaKnown RBP10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 IFT27Q9BW83 186 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RBM4Q9BWF3 364 aaKnown RBP10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 CACNG6Q9BXT2 260 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 RNF121Q9H920 327 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 ZNF556Q9HAH1 456 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 REV1Q9UBZ9 1251 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 ENOPH1Q9UHY7 261 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 NDRG4Q9ULP0 352 aaKnown RBP10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 USF3Q68DE3 2245 aa10.68□□□□□ -0.7
CLCNKA-205ENST00000477360 HEATR1Q9H583 2144 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SOCS2O14508 198 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC16A7O60669 478 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 PPP1R3DO95685 299 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 BAG2O95816 211 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ALPLP05186 524 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ERCC1P07992 297 aaPredicted RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 OSMP13725 252 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ZNF32P17041 273 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 CDAP32320 146 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 APLNRP35414 380 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 THBS4P35443 961 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 CDKN2AP42771 156 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 EFNA4P52798 201 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 PSG4Q00888 419 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC34A1Q06495 639 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SNTB2Q13425 540 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ENDOGQ14249 297 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 PABPC1L2AQ5JQF8 200 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 PTCHD4Q6ZW05 846 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 BIVMQ86UB2 503 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 JAZF1Q86VZ6 243 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ATG16L2Q8NAA4 619 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 WFDC11Q8NEX6 87 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 OR2T33Q8NG76 320 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 NSMAFQ92636 917 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 MRPL24Q96A35 216 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 FBXO17Q96EF6 278 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 POM121L2Q96KW2 1035 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 COG8Q96MW5 612 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 DCLRE1CQ96SD1 692 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 DOK1Q99704 481 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 CIB1Q99828 191 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 ZNF416Q9BWM5 594 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 OR2H1Q9GZK4 316 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 NUAK2Q9H093 628 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 MS4A5Q9H3V2 200 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 SEC61A2Q9H9S3 476 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 CDH20Q9HBT6 801 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 TMEFF2Q9UIK5 374 aaPredicted RBP10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 GPR160Q9UJ42 338 aa10.67□□□□□ -0.7
CLCNKA-205ENST00000477360 IGLV1-36A0A0B4J1U3 117 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms