RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 RASD2Q96D21 266 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 ZNF229Q9UJW7 825 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 KIAA1257Q9ULG3 409 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 CSDC2Q9Y534 153 aaKnown RBP2.05□□□□□ -2.08
LTN1-204ENST00000475344 UBIAD1Q9Y5Z9 338 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 USP47Q96K76 1375 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 AKNAQ7Z591 1439 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 IGLV1-50A0A075B6I6 118 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 HEATR9A2RTY3 570 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 RAD51BO15315 384 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 WBP4O75554 376 aaKnown RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 SLC25A14O95258 325 aaPredicted RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 UTS2O95399 124 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 IGHV1-8P0DP01 117 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 CHMLP26374 656 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 TAGLN2P37802 199 aaKnown RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 RFX3P48380 749 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 CCNHP51946 323 aaPredicted RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 ESRRGP62508 458 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ARG2P78540 354 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ADARB1P78563 741 aaKnown RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 HMGN5P82970 282 aaKnown RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 PITPNAQ00169 270 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 TWF1Q12792 350 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ECH1Q13011 328 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ERCC8Q13216 396 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 GINS1Q14691 196 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 IRF4Q15306 451 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 POU2AF1Q16633 256 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 SDK2Q58EX2 2172 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 BHLHA15Q7RTS1 189 aaPredicted RBP2.04□□□□□ -2.08
LTN1-204ENST00000475344 ASCL5Q7RTU5 278 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 OAFQ86UD1 273 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 FAM228AQ86W67 206 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 OR7G2Q8NG99 324 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 OR1S2Q8NGQ3 325 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 FAM3DQ96BQ1 224 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 L3HYPDHQ96EM0 354 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 RNF157Q96PX1 679 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 CHAC1Q9BUX1 264 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 RACGAP1Q9H0H5 632 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 CWH43Q9H720 699 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 C12orf10Q9HB07 376 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ZNF586Q9NXT0 402 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ING4Q9UNL4 249 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 GOLT1BQ9Y3E0 138 aa2.04□□□□□ -2.08
LTN1-204ENST00000475344 ZNF716A6NP11 495 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 HIDE1A8MVS5 230 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 CIB2O75838 187 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 GABARAPO95166 117 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 AIFM1O95831 613 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 HLA-DPB1P04440 258 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 IL4P05112 153 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 ZNF735P0CB33 412 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 RAB3BP20337 219 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 AQP2P41181 271 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 NAA10P41227 235 aaPredicted RBP2.03□□□□□ -2.08
LTN1-204ENST00000475344 NSG1P42857 185 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 CX3CR1P49238 355 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 ACLYP53396 1101 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 NUTF2P61970 127 aaKnown RBP2.03□□□□□ -2.08
LTN1-204ENST00000475344 LRRC74AQ0VAA2 488 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 WDR86Q86TI4 376 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 HSD17B11Q8NBQ5 300 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 FBXL13Q8NEE6 735 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 AKR7LQ8NHP1 331 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 CCDC126Q96EE4 140 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 HMG20AQ9NP66 347 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 FAM49BQ9NUQ9 324 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 GPATCH2LQ9NWQ4 482 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 PISDQ9UG56 409 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 PSG8Q9UQ74 426 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 KCNE3Q9Y6H6 103 aa2.03□□□□□ -2.08
LTN1-204ENST00000475344 NLRC5Q86WI3 1866 aa2.03□□□□□ -2.09
LTN1-204ENST00000475344 GPATCH8Q9UKJ3 1502 aaKnown RBP2.02□□□□□ -2.09
LTN1-204ENST00000475344 SHROOM3Q8TF72 1996 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 IGHV5-10-1A0A0J9YXX1 117 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CCDC169A6NNP5 214 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 UBXN8O00124 270 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CDRT1O95170 752 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 SNX4O95219 450 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 IGHDP01880 384 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 FABP3P05413 133 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 UQCRFS1P1P0C7P4 283 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 ZNF24P17028 368 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 F2RP25116 425 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 OTX1P32242 354 aaPredicted RBP2.02□□□□□ -2.09
LTN1-204ENST00000475344 CDKN2BP42772 138 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CDKN1BP46527 198 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 CSNK1A1P48729 337 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 IDI1Q13907 227 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 XKR7Q5GH72 579 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 ANKRD26P1Q6NSI1 321 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 Q6ZSR3 168 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 SLC22A9Q8IVM8 553 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 OR4C5Q8NGB2 326 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 OR10J6PQ8NGY7 276 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 RNF139Q8WU17 664 aa2.02□□□□□ -2.09
LTN1-204ENST00000475344 ABHD3Q8WU67 409 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms