RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 TAS2R43P59537 309 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 RPL13AP3Q6NVV1 102 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 DNM1P46Q6ZS02 220 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 DEFB119Q8N690 84 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 OR4C16Q8NGL9 310 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 OR1J4Q8NGS1 313 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 OR4C3Q8NH37 302 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 PAQR8Q8TEZ7 354 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 DUSP19Q8WTR2 217 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ZNRF4Q8WWF5 429 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 HOXB13Q92826 284 aaPredicted RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 RBM18Q96H35 190 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ZC3H10Q96K80 434 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 LMF2Q9BU23 707 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 SMCO4Q9NRQ5 59 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM100Q9NV29 134 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ASH2LQ9UBL3 628 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ANKRD61A6NGH8 418 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ACOT7O00154 380 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
CCNL1-216ENST00000475298 SFTPCP11686 197 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 CLDN12P56749 244 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 CCINQ13939 588 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 FAM76BQ5HYJ3 339 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM69Q5SWH9 247 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 PARGQ86W56 976 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 BEST3Q8N1M1 668 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 GATSQ8NAP1 163 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 ARL11Q969Q4 196 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 OR14A2Q96R54 314 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 NRIP2Q9BQI9 281 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 LAT2Q9GZY6 243 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 FAM96BQ9Y3D0 163 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 IER3IP1Q9Y5U9 82 aa11.75□□□□□ -0.53
CCNL1-216ENST00000475298 MPDZO75970 2070 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CDK2P24941 298 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 SLC6A6P31641 620 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 PPM1FP49593 454 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 F2RL1P55085 397 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 TAS2R60P59551 318 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 MRPS10P82664 201 aaKnown RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 KIAA0895LQ68EN5 471 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 PWWP2BQ6NUJ5 590 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 POMGNT2Q8NAT1 580 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 OR6N1Q8NGY5 312 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 C1orf216Q8TAB5 229 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 SYNPRQ8TBG9 265 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 ZPLD1Q8TCW7 415 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 MARS2Q96GW9 593 aaKnown RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CLDN16Q9Y5I7 305 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 C2CD4DB7Z1M9 353 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CT45A8P0DMV1 189 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CT45A9P0DMV2 189 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 SLC25A4P12235 298 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 AVPR2P30518 371 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CSNK1EP49674 416 aaKnown RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 SKP2Q13309 424 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 TGIF1Q15583 401 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 MST1LQ2TV78 715 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CT45A2Q5DJT8 189 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 PYY3Q5JQD4 70 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 LIN54Q6MZP7 749 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM200AQ86VY9 491 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 GTPBP8Q8N3Z3 284 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 C16orf52Q8NHV5 167 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 CPNE2Q96FN4 548 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 TRIM2Q9C040 744 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 APMAPQ9HDC9 416 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 NRIP3Q9NQ35 241 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 INPP5EQ9NRR6 644 aa11.74□□□□□ -0.53
CCNL1-216ENST00000475298 WSB2Q9NYS7 404 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM184BQ9Y519 407 aaPredicted RBP11.74□□□□□ -0.53
CCNL1-216ENST00000475298 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 SULT2B1O00204 365 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
CCNL1-216ENST00000475298 ITGA3P26006 1051 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 CASRP41180 1078 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 TAS2R20P59543 309 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 RAB30Q15771 203 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 PRTGQ2VWP7 1150 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 C4orf46Q504U0 113 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 ACOT7LQ6ZUV0 252 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 C1orf198Q9H425 327 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 OPA3Q9H6K4 179 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 MMP26Q9NRE1 261 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 PRTFDC1Q9NRG1 225 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 FBXL21Q9UKT6 434 aa11.73□□□□□ -0.53
CCNL1-216ENST00000475298 PCDH15Q96QU1 1955 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms