RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CCDC182A6NF36 153 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 A6NNC1 897 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 RIIAD1A6NNX1 92 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 KHDRBS3O75525 346 aaKnown RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 CTAG2O75638 210 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 PLAUP00749 431 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 IGKV3-15P01624 115 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 HMGN1P05114 100 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 OR8G3PP0DMU2 310 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 HOXB1P14653 301 aaPredicted RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 SPI1P17947 270 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 DNASE1P24855 282 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 GGT2P36268 569 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF83P51522 516 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 SLC34A1Q06495 639 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 PIGFQ07326 219 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 SPOCK1Q08629 439 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 RIPK1Q13546 671 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 KCNMB1Q16558 191 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 NRN1LQ496H8 165 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 ALKBH2Q6NS38 261 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 PLBD1Q6P4A8 553 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 B3GLCTQ6Y288 498 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 MDP1Q86V88 176 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 JAZF1Q86VZ6 243 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 CPOQ8IVL8 374 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 GLB1L2Q8IW92 636 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 LRRC18Q8N456 261 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 GALNT4Q8N4A0 578 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF511Q8NB15 262 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 CPEB3Q8NE35 698 aaKnown RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 LILRB1Q8NHL6 650 aaPredicted RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 C11orf40Q8WZ69 217 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 TMEM158Q8WZ71 300 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 EME1Q96AY2 570 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 MS4A3Q96HJ5 214 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 HRASLS5Q96KN8 279 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 PITX2Q99697 317 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 TMEM204Q9BSN7 226 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 NDEL1Q9GZM8 345 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 RIBC2Q9H4K1 309 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 RERGLQ9H628 205 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 SIAEQ9HAT2 523 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF226Q9NYT6 803 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 TVP23BQ9NYZ1 205 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 NDRG3Q9UGV2 375 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 KLHL21Q9UJP4 597 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 NDRG4Q9ULP0 352 aaKnown RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 RRP15Q9Y3B9 282 aaKnown RBP6.07□□□□□ -1.44
LIMD1-204ENST00000474665 LHFPL6Q9Y693 200 aa6.07□□□□□ -1.44
LIMD1-204ENST00000474665 CUBNO60494 3623 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 IGHV1-18A0A0C4DH31 117 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 A0A1W2PPL8 197 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 TVP23AA6NH52 213 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 SLC16A6O15403 523 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 ATP6V1G2O95670 118 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 WNT11O96014 354 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 RENP00797 406 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CST2P09228 141 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CECR9P0C854 216 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CBR1P16152 277 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF14P17017 642 aaPredicted RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF32P17041 273 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 GABRB1P18505 474 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CRABP1P29762 137 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PEX19P40855 299 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 RPS27P42677 84 aaKnown RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF84P51523 738 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 HIST1H3AP68431 136 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 ADARB1P78563 741 aaKnown RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PSG4Q00888 419 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 HSF2Q03933 536 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 BSPH1Q075Z2 132 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 SNAPC1Q16533 368 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 SGCAQ16586 387 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PCK2Q16822 640 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 RSPO1Q2MKA7 263 aaPredicted RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 NCMAPQ5T1S8 102 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 HIST2H3PS2Q5TEC6 136 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 AADACL4Q5VUY2 407 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CORO6Q6QEF8 472 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 HIST2H3AQ71DI3 136 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 CIARTQ8N365 385 aaPredicted RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PAQR4Q8N4S7 273 aaPredicted RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PACRGLQ8N7B6 248 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 FAM169BQ8N8A8 192 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 TCEANCQ8N8B7 351 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 OR10S1Q8NGN2 331 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 FNDC8Q8TC99 324 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 SMAP2Q8WU79 429 aaPredicted RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 NEUROG1Q92886 237 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 IL4I1Q96RQ9 567 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 USB1Q9BQ65 265 aaKnown RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 OR2H1Q9GZK4 316 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 WNT5BQ9H1J7 359 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 WDR76Q9H967 626 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 MARCH7Q9H992 704 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 OBP2BQ9NPH6 170 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms