RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FAM162AQ96A26 154 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 MARS2Q96GW9 593 aaKnown RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 KCTD14Q9BQ13 255 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 WNT5BQ9H1J7 359 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 SAP30LQ9HAJ7 183 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 ELOVL3Q9HB03 270 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 HIF1ANQ9NWT6 349 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 TREM2Q9NZC2 230 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 GMPR2Q9P2T1 348 aaKnown RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 GRHPRQ9UBQ7 328 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 CGGBP1Q9UFW8 167 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 RPS6KA6Q9UK32 745 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 ICMTO60725 284 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 PRSS23O95084 383 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 CD14P08571 375 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 FUT4P22083 530 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 NUDT2P50583 147 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 LMO4P61968 165 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 GLO1Q04760 184 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 FHL1Q13642 323 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 HFEQ30201 348 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 ZBED5Q49AG3 693 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 MEX3DQ86XN8 651 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 TEX29Q8N6K0 151 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 CLDN22Q8N7P3 220 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 SLC25A40Q8TBP6 338 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 RAB39BQ96DA2 213 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 CMTM5Q96DZ9 223 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 ELMOD3Q96FG2 381 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 TIMD4Q96H15 378 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 EGLN1Q9GZT9 426 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 NMNAT1Q9HAN9 279 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 NDRG4Q9ULP0 352 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 FAM32AQ9Y421 112 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 ENPP4Q9Y6X5 453 aa17.35■□□□□ 0.37
PDLIM4-206ENST00000474421 TRAV20A0A0B4J274 112 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 FAM157AC9JC47 383 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 CLDN25C9JDP6 229 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 WNT9BO14905 357 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 GPR4P46093 362 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 TSTQ16762 297 aaKnown RBP17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 ZMAT1Q5H9K5 638 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 SPATA46Q5T0L3 261 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 USP51Q70EK9 711 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 ABHD4Q8TB40 342 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 KLF14Q8TD94 323 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 IPCEF1Q8WWN9 437 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 POLE4Q9NR33 117 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 METRNQ9UJH8 293 aa17.34■□□□□ 0.37
PDLIM4-206ENST00000474421 A0A1W2PRQ8 180 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 COX5BP10606 129 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 TUBG1P23258 451 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 MMP15P51511 669 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 PPP1CBP62140 327 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 SLC3A1Q07837 685 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 SCRN3Q0VDG4 424 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 DGCR6Q14129 220 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ENDOGQ14249 297 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ACSM5Q6NUN0 579 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ZNF774Q6NX45 483 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 TBPL2Q6SJ96 375 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 RFPL4BQ6ZWI9 263 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ZER1Q7Z7L7 766 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 RAB1CQ92928 201 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 C4orf45Q96LM5 186 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ZNF570Q96NI8 536 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 LRRC37BQ96QE4 947 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 DIRC2Q96SL1 478 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 OR2J1Q9GZK6 312 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 LPAR2Q9HBW0 351 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 TUBG2Q9NRH3 451 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ABCD2Q9UBJ2 740 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 ZDHHC8Q9ULC8 765 aa17.33■□□□□ 0.36
PDLIM4-206ENST00000474421 CDC42EP2O14613 210 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 SPRY3O43610 288 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 GMNNO75496 209 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 IGHV1-46P01743 117 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 H1F0P07305 194 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 ADH4P08319 380 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 MPV17P39210 176 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 MVKQ03426 396 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 GPR139Q6DWJ6 353 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 SHQ1Q6PI26 577 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 TREML1Q86YW5 311 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 SLC7A13Q8TCU3 470 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 GTF3AQ92664 365 aaKnown RBP17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 ZNF665Q9H7R5 613 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 KRCC1Q9NPI7 259 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 ADAM18Q9Y3Q7 739 aa17.32■□□□□ 0.36
PDLIM4-206ENST00000474421 PRSS37A4D1T9 235 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 H7C1C5 153 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 NDUFB2O95178 105 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 ABHD16AO95870 558 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 RHCEP18577 417 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 GSTM3P21266 225 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 PSME3P61289 254 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 LCN6P62502 163 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 SRSF2Q01130 221 aaKnown RBP17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 AVPI1Q5T686 147 aa17.31■□□□□ 0.36
PDLIM4-206ENST00000474421 FAM122BQ7Z309 247 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms