RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SOCS2O14508 198 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 OR10H3O60404 316 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 SLC16A7O60669 478 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 KHDRBS3O75525 346 aaKnown RBP9.58□□□□□ -0.88
CKS1B-206ENST00000474215 KRT36O76013 467 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 T-ENOLP0DO92 83 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 IGHV4-31P0DP07 118 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 LYNX1P0DP58 116 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 NAT2P11245 290 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 APEHP13798 732 aaKnown RBP9.58□□□□□ -0.88
CKS1B-206ENST00000474215 CTLA4P16410 223 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF23P17027 643 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 FPR3P25089 353 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RRM2P31350 389 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 IFNGR2P38484 337 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 CDKN2AP42771 156 aaKnown RBP9.58□□□□□ -0.88
CKS1B-206ENST00000474215 GZMKP49863 264 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RPS6KA3P51812 740 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 HMGA2P52926 109 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 ERVS71-1P61550 626 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RIN1Q13671 783 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 NKPD1Q17RQ9 610 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RFX4Q33E94 735 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 C6orf52Q5T4I8 152 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF774Q6NX45 483 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 UGT2A3Q6UWM9 527 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 CYP2R1Q6VVX0 501 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RINLQ6ZS11 566 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 HIPK1Q86Z02 1210 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 GLB1L2Q8IW92 636 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 C1orf174Q8IYL3 243 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF101Q8IZC7 436 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 ICA1LQ8NDH6 482 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 SYT4Q9H2B2 425 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 RERGLQ9H628 205 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 EMC7Q9NPA0 242 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 HINT3Q9NQE9 182 aaKnown RBP9.58□□□□□ -0.88
CKS1B-206ENST00000474215 VSX1Q9NZR4 365 aaPredicted RBP9.58□□□□□ -0.88
CKS1B-206ENST00000474215 TAAR3PQ9P1P4 343 aa9.58□□□□□ -0.88
CKS1B-206ENST00000474215 IMPA2O14732 288 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ICMTO60725 284 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MPZL1O95297 269 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 HPXP02790 462 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MT-ND5P03915 603 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 COX5BP10606 129 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ATP6V1B2P21281 511 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 CALB2P22676 271 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 COL8A2P25067 703 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 SLC6A6P31641 620 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 WNT5AP41221 380 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 GSSP48637 474 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MRPS11P82912 194 aaKnown RBP9.57□□□□□ -0.88
CKS1B-206ENST00000474215 TRIM25Q14258 630 aaKnown RBP9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ALKBH6Q3KRA9 238 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF718Q3SXZ3 478 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MTX3Q5HYI7 312 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ELFN2Q5R3F8 820 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 C1orf94Q6P1W5 598 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 TMEM154Q6P9G4 183 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ARL9Q6T311 187 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 PTCHD4Q6ZW05 846 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 DHFR2Q86XF0 187 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 GNPDA2Q8TDQ7 276 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 RDH5Q92781 318 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MARS2Q96GW9 593 aaKnown RBP9.57□□□□□ -0.88
CKS1B-206ENST00000474215 C4orf45Q96LM5 186 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 ERMAPQ96PL5 475 aaPredicted RBP9.57□□□□□ -0.88
CKS1B-206ENST00000474215 NUAK2Q9H093 628 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 OR52D1Q9H346 318 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 MUC13Q9H3R2 512 aa9.57□□□□□ -0.88
CKS1B-206ENST00000474215 COA3Q9Y2R0 106 aaPredicted RBP9.57□□□□□ -0.88
CKS1B-206ENST00000474215 LOC100289279A0A1B0GTE1 492 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TCRBV5S2A0A599 114 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 C17orf100A8MU93 164 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 ARPC3O15145 178 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 SGCEO43556 437 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 IDH3BO43837 385 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 LILRA1O75019 489 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 PPP1R3DO95685 299 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 NGFP01138 241 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TACSTD2P09758 323 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 ACHEP22303 614 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 CRABP1P29762 137 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 GCH1P30793 250 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 MAGEB1P43366 347 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 CHN2P52757 468 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TMEM33P57088 247 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 PPP1CBP62140 327 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 LSM6P62312 80 aaKnown RBP9.56□□□□□ -0.88
CKS1B-206ENST00000474215 CCL8P80075 99 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 MS4A2Q01362 244 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 SCRN3Q0VDG4 424 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TSPAN31Q12999 210 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 KCNMB1Q16558 191 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 PCGF3Q3KNV8 242 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 SPATA46Q5T0L3 261 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 ABHD4Q8TB40 342 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms