RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 H3BNH8 94 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 hCG_2039718K7EN88 272 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CCL24O00175 119 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CACNB4O00305 520 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FOXE1O00358 373 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TXNDC9O14530 226 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RFXANKO14593 260 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 KMOO15229 486 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC31A1O15431 190 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MAGEB4O15481 346 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DENRO43583 198 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TBX19O60806 448 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DNAJB6O75190 326 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 BCAS1O75363 584 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SEC22BO75396 215 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SEMA3DO95025 777 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NXPH4O95158 308 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SCELO95171 688 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CPNE6O95741 557 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SEMA4FO95754 770 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF682O95780 498 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 AIFM1O95831 613 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IGLV3-19P01714 112 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OPN1SWP03999 348 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IL6P05231 212 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 KLK1P06870 262 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CSN3P07498 182 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RETP07949 1114 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 IGFBP1P08833 259 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ANXA4P09525 319 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 HIST1H2AGP0C0S8 130 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PABPC4LP0CB38 370 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NPIPA8P0DM63 369 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 C1GALT1C1LP0DN25 315 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ALPPL2P10696 532 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PRPS2P11908 318 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 F3P13726 295 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GLULP15104 373 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PVRP15151 417 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 UGT2B7P16662 529 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ELK1P19419 428 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MAGP20916 626 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 BCKDHBP21953 392 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ACHEP22303 614 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 HNRNPA2B1P22626 353 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PAX7P23759 505 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FASP25445 335 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ELAVL4P26378 380 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GIFP27352 417 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ELK4P28324 431 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 AQP1P29972 269 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 S100A3P33764 101 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PCGF2P35227 344 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SOAT1P35610 550 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 POLR2IP36954 125 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ACTR1BP42025 376 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FRKP42685 505 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TNFRSF4P43489 277 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ASMTP46597 345 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RPS9P46781 194 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 YAP1P46937 504 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 OR3A2P47893 321 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ALDH3B2P48448 385 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GSSP48637 474 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TRPC1P48995 793 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DAPP51397 102 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TPMTP51580 245 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ALDH3A2P51648 485 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CCR8P51685 355 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DSTNP60981 165 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RAB8AP61006 207 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ACTR1AP61163 376 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ADARB1P78563 741 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TNFRSF17Q02223 184 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PLOD1Q02809 727 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FOLH1Q04609 750 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RBPJQ06330 500 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF763Q0D2J5 394 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 C2orf80Q0P641 193 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RPA4Q13156 261 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SCARB2Q14108 478 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GANABQ14697 944 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ARHGAP19Q14CB8 494 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CEBPEQ15744 281 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NPTX1Q15818 432 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZIC1Q15915 447 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CYP51A1Q16850 503 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC5A12Q1EHB4 618 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CNPY1Q3B7I2 92 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ADPRMQ3LIE5 342 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SLC36A3Q495N2 470 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 LIN52Q52LA3 116 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CYBRD1Q53TN4 286 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF542PQ5EBM4 170 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PAGE2BQ5JRK9 111 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 KRBOX4Q5JUW0 171 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF691Q5VV52 312 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FAM46CQ5VWP2 391 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms